RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 NACA2Q9H009 215 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 CCDC195A0A1B0GUA6 201 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 SYDE1Q6ZW31 735 aaPredicted RBP17.65■□□□□ 0.42
SCARB2-210ENST00000638567 KCNK18Q7Z418 384 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 OR6B3Q8NGW1 331 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 SGSM3Q96HU1 749 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 FIS1Q9Y3D6 152 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 NUB1Q9Y5A7 615 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 DIAPH2O60879 1101 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 GRAMD1BQ3KR37 738 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 SUPT20HL1Q3ZLR7 823 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 ZNF507Q8TCN5 953 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 AENQ8WTP8 325 aaKnown RBP17.65■□□□□ 0.42
SCARB2-210ENST00000638567 BTBD6Q96KE9 485 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 ZSWIM1Q9BR11 485 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 SENP1Q9P0U3 644 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 NEU2Q9Y3R4 380 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 USH1CQ9Y6N9 552 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 TCHHQ07283 1943 aa17.65■□□□□ 0.42
SCARB2-210ENST00000638567 VIRMAQ69YN4 1812 aaKnown RBP17.64■□□□□ 0.42
SCARB2-210ENST00000638567 CAND2O75155 1236 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 LMNAP02545 664 aaKnown RBP17.64■□□□□ 0.41
SCARB2-210ENST00000638567 RCCD1A6NED2 376 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 BAG6P46379 1132 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 ERFP50548 548 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 SYCP2LQ5T4T6 812 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 TSEN2Q8NCE0 465 aaKnown RBP17.64■□□□□ 0.41
SCARB2-210ENST00000638567 ERP27Q96DN0 273 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 RIT2Q99578 217 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 FAM47DPA6NHR8 397 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 RNF225M0QZC1 329 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-210ENST00000638567 XPOTO43592 962 aaKnown RBP17.64■□□□□ 0.41
SCARB2-210ENST00000638567 BCAR1P56945 870 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 SMAD1Q15797 465 aaKnown RBP17.64■□□□□ 0.41
SCARB2-210ENST00000638567 SPOPLQ6IQ16 392 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 EPS8L3Q8TE67 593 aaKnown RBP17.64■□□□□ 0.41
SCARB2-210ENST00000638567 GTF3C4Q9UKN8 822 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 PCDHB2Q9Y5E7 798 aa17.64■□□□□ 0.41
SCARB2-210ENST00000638567 M0QYV0 167 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 DGAT1O75907 488 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 RIC1Q4ADV7 1423 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 FAM102AQ5T9C2 384 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 GLIS3Q8NEA6 775 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 TMEM143Q96AN5 459 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 PPWD1Q96BP3 646 aaKnown RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 FAM161BQ96MY7 647 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 ROPN1BQ9BZX4 212 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 SMYD3Q9H7B4 428 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 VCPKMTQ9H867 229 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 ROPN1Q9HAT0 212 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 CD248Q9HCU0 757 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 KCNH7Q9NS40 1196 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 AARSP49588 968 aaKnown RBP eCLIP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 GPC3P51654 580 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 CDH6P55285 790 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 BAATQ14032 418 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 PRPSAP1Q14558 356 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 DUOXA2Q1HG44 320 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 SLC30A10Q6XR72 485 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 MXRA8Q9BRK3 442 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 KIFC3Q9BVG8 833 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 FBXO28Q9NVF7 368 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 AIPL1Q9NZN9 384 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 POLLQ9UGP5 575 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 F5H423 210 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 KLRC4O43908 158 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 ERVK-9P63128 1117 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 IL17AQ16552 155 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 RFX8Q6ZV50 586 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 DDX56Q9NY93 547 aaKnown RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 EPHB6O15197 1021 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 ENTPD3O75355 529 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 CHRNA5P30532 468 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 EPHB1P54762 984 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 RBBP8NLQ8NC74 664 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 ATG4AQ8WYN0 398 aa17.63■□□□□ 0.41
SCARB2-210ENST00000638567 DCPSQ96C86 337 aaKnown RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 JPH1Q9HDC5 661 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-210ENST00000638567 F8VZ95 297 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 CNGA1P29973 690 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 SDC4P31431 198 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 C2CD6Q53TS8 623 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 C1orf146Q5VVC0 180 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 SPATA20Q8TB22 786 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 SPDL1Q96EA4 605 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 TTC1Q99614 292 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 TMEM8AQ9HCN3 771 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 APOBEC2Q9Y235 224 aaKnown RBP17.62■□□□□ 0.41
SCARB2-210ENST00000638567 SIK3Q9Y2K2 1263 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 KIF3CO14782 793 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 P4HA2O15460 535 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 KRT3P12035 628 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 MAGEA4P43358 317 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
SCARB2-210ENST00000638567 CYB5D1Q6P9G0 228 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 CBWD1Q9BRT8 395 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms