RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
TARDBP-221ENST00000619555 CUL4AQ13619 759 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 GNL2Q13823 731 aaKnown RBP12.3□□□□□ -0.44
TARDBP-221ENST00000619555 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 HAUS3Q68CZ6 603 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 SIX5Q8N196 739 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 ST13P5Q8NFI4 369 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-221ENST00000619555 LNX1Q8TBB1 728 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-221ENST00000619555 CLSTN3Q9BQT9 956 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 ADPGKQ9BRR6 497 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 TTPALQ9BTX7 342 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 EPS15L1Q9UBC2 864 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 LRWD1Q9UFC0 647 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 VWA8A3KMH1 1905 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 CFAP54Q96N23 3096 aa12.3□□□□□ -0.44
TARDBP-221ENST00000619555 EP300Q09472 2414 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-221ENST00000619555 GVINP1Q7Z2Y8 2422 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 ADAM12O43184 909 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 ZMYND10O75800 440 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 CFHP08603 1231 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 MUTP22033 750 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 TRAPPC10P48553 1259 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 TOB1P50616 345 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-221ENST00000619555 CREMQ03060 361 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 PTGDRQ13258 359 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 PSMD5Q16401 504 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 GLRA4Q5JXX5 417 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 GET4Q7L5D6 327 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-221ENST00000619555 SLC44A3Q8N4M1 653 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 KIFAP3Q92845 792 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 IFT74Q96LB3 600 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 DDX19AQ9NUU7 478 aaKnown RBP12.29□□□□□ -0.44
TARDBP-221ENST00000619555 FBXW11Q9UKB1 542 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 NOL7Q9UMY1 257 aaKnown RBP12.29□□□□□ -0.44
TARDBP-221ENST00000619555 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
TARDBP-221ENST00000619555 VPS13AQ96RL7 3174 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 PP2D1A8MPX8 630 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 E9PMD0 336 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 LAMP2P13473 410 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 AOC1P19801 751 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 U2AF2P26368 475 aaKnown RBP eCLIP12.28□□□□□ -0.442e-10■□□□□ 10.5
TARDBP-221ENST00000619555 GJB2P29033 226 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 EFNA5P52803 228 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 NTHL1P78549 312 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 PDIA5Q14554 519 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 IL17AQ16552 155 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 DCAF4L1Q3SXM0 396 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 ATF7IP2Q5U623 682 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 CD300LGQ6UXG3 332 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 SNX29Q8TEQ0 813 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 CA14Q9ULX7 337 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 WDR87Q6ZQQ6 2873 aa12.28□□□□□ -0.44
TARDBP-221ENST00000619555 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 CCDC169A6NNP5 214 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 PROB1E7EW31 1015 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 K7ELQ4 463 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-221ENST00000619555 K7ERI5 159 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 STK25O00506 426 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 CCL16O15467 120 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 FGFR3P22607 806 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 FSHRP23945 695 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 CDC25AP30304 524 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 PEX3P56589 373 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 ELAVL2Q12926 359 aaKnown RBP12.27□□□□□ -0.45
TARDBP-221ENST00000619555 DCLRE1AQ6PJP8 1040 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 RSPO2Q6UXX9 243 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-221ENST00000619555 GRASPQ7Z6J2 395 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-221ENST00000619555 DAW1Q8N136 415 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 CEP120Q8N960 986 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 IGSF22Q8N9C0 903 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 SNX21Q969T3 373 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
TARDBP-221ENST00000619555 RPP25Q9BUL9 199 aaKnown RBP12.27□□□□□ -0.45
TARDBP-221ENST00000619555 RUSC1Q9BVN2 902 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 GOLGA2P5Q9HBQ8 144 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.27□□□□□ -0.45
TARDBP-221ENST00000619555 WNT16Q9UBV4 365 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 CACNA1IQ9P0X4 2223 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 NOTCH4Q99466 2003 aa12.27□□□□□ -0.45
TARDBP-221ENST00000619555 SMIM28A0A1B0GU29 152 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 ANHXE9PGG2 379 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 I3L4J1 428 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 HIP1RO75146 1068 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 B3GAT3O94766 335 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 C8AP07357 584 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 SRFP11831 508 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 OR1D2P34982 312 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 NBL1P41271 181 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 NPTX2P47972 431 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 CLCNKBP51801 687 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 OSTNP61366 133 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 HTR4Q13639 388 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 PPM1LQ5SGD2 360 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 LIN9Q5TKA1 542 aa12.26□□□□□ -0.45
TARDBP-221ENST00000619555 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms