RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 NCAPHQ15003 741 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 EDRF1Q3B7T1 1238 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 C3orf20Q8ND61 904 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 CEP70Q8NHQ1 597 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 RNF217Q8TC41 542 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 LPAR1Q92633 364 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 HEMGNQ9BXL5 484 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PIM2Q9P1W9 311 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 DIP2CQ9Y2E4 1556 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 ATP1A1P05023 1023 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 ITIH2P19823 946 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 EIF3EP60228 445 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 DPYDQ12882 1025 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 SLC18A3Q16572 532 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 SPATA21Q7Z572 469 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PRUNE1Q86TP1 453 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 C2orf69Q8N8R5 385 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 KLC4Q9NSK0 619 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 WARS2Q9UGM6 360 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 FBXO2Q9UK22 296 aaPredicted RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 P4HA2O15460 535 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 TBC1D4O60343 1298 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 CDH6P55285 790 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 ZNF235Q14590 738 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 SNX17Q15036 470 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 EFL1Q7Z2Z2 1120 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 LCA5Q86VQ0 697 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PDLIM2Q96JY6 352 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 PLEKHA5Q9HAU0 1116 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 BLOC1S6Q9UL45 172 aa4.82□□□□□ -1.64
CHD9-221ENST00000615216 MTO1Q9Y2Z2 717 aaKnown RBP4.82□□□□□ -1.64
CHD9-221ENST00000615216 TCP11X1B4DZS4 312 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 IGKV5-2P06315 115 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SRGNP10124 158 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 HOXD10P28358 340 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 RFC5P40937 340 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 TPI1P60174 286 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 KRT72Q14CN4 511 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 FASTKD1Q53R41 847 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 HABP4Q5JVS0 413 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 TTC39BQ5VTQ0 682 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 LRRC8EQ6NSJ5 796 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SETD3Q86TU7 594 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 CCNYL1Q8N7R7 359 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 ARHGEF26Q96DR7 871 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 MRPL1Q9BYD6 325 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 FRMD8Q9BZ67 464 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 ROPN1BQ9BZX4 212 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 ROPN1Q9HAT0 212 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 DIP2BQ9P265 1576 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 G3BP2Q9UN86 482 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DFFAO00273 331 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PCYT1AP49585 367 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 RAD51Q06609 339 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 AASDHQ4L235 1098 aaPredicted RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 THNSL1Q8IYQ7 743 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SPATA4Q8NEY3 305 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PRMT1Q99873 361 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 ZC4H2Q9NQZ6 224 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 ZFATQ9P243 1243 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 CDYLQ9Y232 598 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PCDHA10Q9Y5I2 948 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 RNF103-CHMP3A0A140T963 221 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 FAM95CA0A1B0GW59 222 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SFI1A8K8P3 1242 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L15C9J2P7 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L13C9JLJ4 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L11C9JVI0 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L18D6R9N7 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L22D6RA61 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L17D6RBQ6 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L19D6RCP7 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L20D6RJB6 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 NCK2O43639 380 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 KLHL2O95198 593 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 HSPA13P48723 471 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 RAD23BP54727 409 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SNAP25P60880 206 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 EXOSC10Q01780 885 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L24Q0WX57 530 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 EPHA7Q15375 998 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 QRICH1Q2TAL8 776 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 USP17L6PQ6QN14 398 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SHC4Q6S5L8 630 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 FAM47EQ6ZV65 393 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 EEPD1Q7L9B9 569 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 DDIASQ8IXT1 998 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 ATPAF2Q8N5M1 289 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 SGSM3Q96HU1 749 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 EGFL8Q99944 293 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 ISCA1Q9BUE6 129 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 PHF20Q9BVI0 1012 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 ETNK1Q9HBU6 452 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 OLFML3Q9NRN5 406 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 HSPBP1Q9NZL4 362 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 MAD2L2Q9UI95 211 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 FNDC3AQ9Y2H6 1198 aaKnown RBP4.81□□□□□ -1.64
CHD9-221ENST00000615216 TCHHQ07283 1943 aa4.81□□□□□ -1.64
CHD9-221ENST00000615216 KIDINS220Q9ULH0 1771 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms