RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.58■□□□□ 0.72
SSBP1-215ENST00000612337 FBXW11Q9UKB1 542 aa19.58■□□□□ 0.72
SSBP1-215ENST00000612337 FBXL21Q9UKT6 434 aa19.58■□□□□ 0.72
SSBP1-215ENST00000612337 ST18O60284 1047 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 GFRA3O60609 400 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 ZMYND10O75800 440 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 NPR3P17342 541 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 PSMD5Q16401 504 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 NT5DC1Q5TFE4 455 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 PDXDC1Q6P996 788 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 CEP57Q86XR8 500 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 CLSTN3Q9BQT9 956 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 RAB34Q9BZG1 259 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 DDX19AQ9NUU7 478 aaKnown RBP19.57■□□□□ 0.72
SSBP1-215ENST00000612337 GDAQ9Y2T3 454 aa19.57■□□□□ 0.72
SSBP1-215ENST00000612337 PROB1E7EW31 1015 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 NARSO43776 548 aaKnown RBP19.56■□□□□ 0.72
SSBP1-215ENST00000612337 AOC1P19801 751 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 TOB1P50616 345 aaPredicted RBP19.56■□□□□ 0.72
SSBP1-215ENST00000612337 PTGDRQ13258 359 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 ATF7IP2Q5U623 682 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 APBB1IPQ7Z5R6 666 aaPredicted RBP19.56■□□□□ 0.72
SSBP1-215ENST00000612337 SIX5Q8N196 739 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 SNX29Q8TEQ0 813 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 RSAD2Q8WXG1 361 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 WNT16Q9UBV4 365 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 VWA8A3KMH1 1905 aa19.56■□□□□ 0.72
SSBP1-215ENST00000612337 RIF1Q5UIP0 2472 aaKnown RBP19.56■□□□□ 0.72
SSBP1-215ENST00000612337 WDR87Q6ZQQ6 2873 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 TMEM189-UBE2V1I3L0A0 370 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 K7ERI5 159 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 HNRNPA1P09651 372 aaKnown RBP eCLIP19.55■□□□□ 0.72
SSBP1-215ENST00000612337 LAMP2P13473 410 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 LIN9Q5TKA1 542 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.55■□□□□ 0.72
SSBP1-215ENST00000612337 GET4Q7L5D6 327 aaPredicted RBP19.55■□□□□ 0.72
SSBP1-215ENST00000612337 SLC44A3Q8N4M1 653 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 PPP1R10Q96QC0 940 aaKnown RBP19.55■□□□□ 0.72
SSBP1-215ENST00000612337 RTP3Q9BQQ7 232 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 DNM3Q9UQ16 869 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 TNFSF13BQ9Y275 285 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 PCDHB6Q9Y5E3 794 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 TRIP11Q15643 1979 aa19.55■□□□□ 0.72
SSBP1-215ENST00000612337 DOCK6Q96HP0 2047 aa19.54■□□□□ 0.72
SSBP1-215ENST00000612337 LAD1O00515 517 aa19.54■□□□□ 0.72
SSBP1-215ENST00000612337 PI15O43692 258 aa19.54■□□□□ 0.72
SSBP1-215ENST00000612337 NBL1P41271 181 aa19.54■□□□□ 0.72
SSBP1-215ENST00000612337 GLRA4Q5JXX5 417 aa19.54■□□□□ 0.72
SSBP1-215ENST00000612337 UROC1Q96N76 676 aa19.54■□□□□ 0.72
SSBP1-215ENST00000612337 ZFP37Q9Y6Q3 630 aaPredicted RBP19.54■□□□□ 0.72
SSBP1-215ENST00000612337 PTPRZ1P23471 2315 aaPredicted RBP19.54■□□□□ 0.72
SSBP1-215ENST00000612337 PHLPP2Q6ZVD8 1323 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 ANHXE9PGG2 379 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 E9PMD0 336 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 C8AP07357 584 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 CFHP08603 1231 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 SRFP11831 508 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 FGFR3P22607 806 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 HOXA9P31269 272 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 PRPHP41219 470 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 NPTX2P47972 431 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 PEX3P56589 373 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 KRT79Q5XKE5 535 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 DCLRE1AQ6PJP8 1040 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 CCDC105Q8IYK2 499 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 ACO2Q99798 780 aaKnown RBP19.53■□□□□ 0.72
SSBP1-215ENST00000612337 TMEM134Q9H6X4 195 aa19.53■□□□□ 0.72
SSBP1-215ENST00000612337 KRBA1A5PL33 1030 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 CCDC169A6NNP5 214 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 PP2D1A8MPX8 630 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 ADAM12O43184 909 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 B3GAT3O94766 335 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 FSHRP23945 695 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 GRM5P41594 1212 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 CLCNKBP51801 687 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 DMP1Q13316 513 aaPredicted RBP19.52■□□□□ 0.72
SSBP1-215ENST00000612337 HTR4Q13639 388 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 RAB33AQ14088 237 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 IL17AQ16552 155 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 UPP1Q16831 310 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 PPM1LQ5SGD2 360 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 GRASPQ7Z6J2 395 aaPredicted RBP19.52■□□□□ 0.72
SSBP1-215ENST00000612337 DAW1Q8N136 415 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 RUSC1Q9BVN2 902 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 CDT1Q9H211 546 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 PTPRHQ9HD43 1115 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 ARHGAP28Q9P2N2 729 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 MTRRQ9UBK8 725 aa19.52■□□□□ 0.72
SSBP1-215ENST00000612337 SMIM28A0A1B0GU29 152 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 HIP1RO75146 1068 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 POU2F2P09086 479 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 IGFBP6P24592 240 aaPredicted RBP19.51■□□□□ 0.71
SSBP1-215ENST00000612337 YARSP54577 528 aaKnown RBP19.51■□□□□ 0.71
SSBP1-215ENST00000612337 UVSSAQ2YD98 709 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 C8orf34Q49A92 452 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 XKR4Q5GH76 650 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 CD300LGQ6UXG3 332 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 ALKAL1Q6UXT8 129 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 DTHD1Q6ZMT9 781 aa19.51■□□□□ 0.71
SSBP1-215ENST00000612337 TAS1R3Q7RTX0 852 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms