RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 MSLNQ13421 630 aaPredicted RBP6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 PLCB4Q15147 1175 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 SNCBQ16143 134 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 CEP78Q5JTW2 689 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 MZT2BQ6NZ67 158 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 MIS18BP1Q6P0N0 1132 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 TMEM53Q6P2H8 277 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 CEP68Q76N32 757 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 TAOK1Q7L7X3 1001 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 NLRX1Q86UT6 975 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 LRRTM3Q86VH5 581 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 CAND1Q86VP6 1230 aaKnown RBP6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 NLRP14Q86W24 1093 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 CKAP2LQ8IYA6 745 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 CEP112Q8N8E3 955 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 GOLM1Q8NBJ4 401 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 SGPP1Q9BX95 441 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 KCTD10Q9H3F6 313 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 CENPHQ9H3R5 247 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 EMC3Q9P0I2 261 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 AGO2Q9UKV8 859 aaKnown RBP6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 STRIP2Q9ULQ0 834 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 YEATS2Q9ULM3 1422 aa6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 VIRMAQ69YN4 1812 aaKnown RBP6.32□□□□□ -1.4
LSM1P2-201ENST00000604911 ZNF804BA4D1E1 1349 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 ELP1O95163 1332 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 A0A0G2JLL6 359 aaPredicted RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 C17orf113A0A1B0GUU1 675 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 F6X3S4 739 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 INO80B-WBP1J3KQ70 363 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 HRKO00198 91 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 TOR1BO14657 336 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 ZBTB14O43829 449 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 EXTL3O43909 919 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 B4GALT4O60513 344 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 CBFA2T3O75081 653 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 RASGRP1O95267 797 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 EIF2S1P05198 315 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 H2AFXP16104 143 aaPredicted RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 ZNF3P17036 446 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 CNGA1P29973 690 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 ATP6V1E1P36543 226 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 CETN2P41208 172 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 NR2C2P49116 596 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 MAPKAPK2P49137 400 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 GALK1P51570 392 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 GUCY2FP51841 1108 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 RARSP54136 660 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 OLR1P78380 273 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 MRPS15P82914 257 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 PDE1BQ01064 536 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 TMEM62Q0P6H9 643 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 AP1B1Q10567 949 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 FAPQ12884 760 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 ITGA7Q13683 1181 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 MTERF2Q49AM1 385 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 PABPC1LQ4VXU2 614 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 THEMIS2Q5TEJ8 643 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 NEK5Q6P3R8 708 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 CEP128Q6ZU80 1094 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 CENPQQ7L2Z9 268 aaPredicted RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 MRPL10Q7Z7H8 261 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 SESTD1Q86VW0 696 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 RAVER1Q8IY67 606 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 RTKN2Q8IZC4 609 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 USHBP1Q8N6Y0 703 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 ANKRD42Q8N9B4 389 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 IFT81Q8WYA0 676 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 OPTNQ96CV9 577 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 HNRNPABQ99729 332 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 APOL5Q9BWW9 433 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 STMN4Q9H169 189 aaPredicted RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 PSTPIP2Q9H939 334 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 HOMER2Q9NSB8 354 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 C9orf78Q9NZ63 289 aaPredicted RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 KLHL3Q9UH77 587 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 TAGLN3Q9UI15 199 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 CNOT6Q9ULM6 557 aaKnown RBP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 AGTPBP1Q9UPW5 1226 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 FHOD1Q9Y613 1164 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 MTUS2Q5JR59 1369 aa6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.31□□□□□ -1.4
LSM1P2-201ENST00000604911 ATAD2BQ9ULI0 1458 aa6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 RSPH10B2B2RC85 870 aa6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 RTCAO00442 366 aaKnown RBP6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 HAT1O14929 419 aa6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 TLR3O15455 904 aaKnown RBP6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 STRNO43815 780 aa6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 URI1O94763 535 aaPredicted RBP6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 RHOBTB3O94955 611 aa6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 INMTO95050 263 aa6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 LUC7L3O95232 432 aaKnown RBP6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 SERPINC1P01008 464 aa6.3□□□□□ -1.4
LSM1P2-201ENST00000604911 RSPH10BP0C881 870 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms