RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 DNAJC28Q9NX36 388 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 PLA2G3Q9NZ20 509 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 ST6GALNAC2Q9UJ37 374 aa4.83□□□□□ -1.64
CKS1BP3-201ENST00000600888 PXDNQ92626 1479 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 ANKARQ7Z5J8 1434 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 PNPLA6Q8IY17 1366 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 PLEKHH1Q9ULM0 1364 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 NPHP3Q7Z494 1330 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 A0A1W2PRX2 142 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 UBE2QL1A1L167 161 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 TRIM75PA6NK02 468 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 MTSS1O43312 755 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 NCLP19338 710 aaKnown RBP4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 EFEMP1Q12805 493 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 GRM7Q14831 915 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 UBE3CQ15386 1083 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 SYDE2Q5VT97 1194 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 CMTM4Q8IZR5 234 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 TTC9BQ8N6N2 239 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 CHST13Q8NET6 341 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 TSPEARQ8WU66 669 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 FATE1Q969F0 183 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 WWC2-AS2Q96NR7 200 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 IFT122Q9HBG6 1241 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 SMPD4Q9NXE4 827 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 STK26Q9P289 416 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 TRHDEQ9UKU6 1024 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 SLC30A1Q9Y6M5 507 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 ABCA3Q99758 1704 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 TRPM3Q9HCF6 1732 aaPredicted RBP4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 TRPM1Q7Z4N2 1603 aa4.82□□□□□ -1.64
CKS1BP3-201ENST00000600888 CDK12Q9NYV4 1490 aaPredicted RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 EIF3AQ14152 1382 aaKnown RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 TOPAZ1Q8N9V7 1692 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 ALS2Q96Q42 1657 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 hCG_2014768A0A024R1R8 64 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 B8ZZF3 427 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 GABRDO14764 452 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 LTA4HP09960 611 aaKnown RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 MAGEA10P43363 369 aaPredicted RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 MTNR1BP49286 362 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 CCT2P78371 535 aaKnown RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 MEF2AQ02078 507 aaPredicted RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 FOXL1Q12952 345 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 C19orf54Q5BKX5 351 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 ZNF772Q68DY9 489 aaPredicted RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 PGM2L1Q6PCE3 622 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 ABHD15Q6UXT9 468 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 AMOTL1Q8IY63 956 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 RPUSD2Q8IZ73 545 aaKnown RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 MSL3Q8N5Y2 521 aaKnown RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 MTMR8Q96EF0 704 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 TMEM176AQ96HP8 235 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 PAWRQ96IZ0 340 aaKnown RBP4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 C8orf49Q96NF6 230 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 DEF6Q9H4E7 631 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 IL23AQ9NPF7 189 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 HOMER2Q9NSB8 354 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 NCDNQ9UBB6 729 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 RCAN3Q9UKA8 241 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 TULP4Q9NRJ4 1543 aa4.81□□□□□ -1.64
CKS1BP3-201ENST00000600888 NWD2Q9ULI1 1742 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 CRYBG1Q9Y4K1 1723 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 PRRG2O14669 202 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 TMEM127O75204 238 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 CFBP00751 764 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 COMTP21964 271 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 CTSSP25774 331 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 MSX2P35548 267 aaPredicted RBP4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 IARSP41252 1262 aaKnown RBP4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 NPEPPSP55786 919 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 ANAPC15P60006 121 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 IGBP1P78318 339 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 ADRM1Q16186 407 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 ANO4Q32M45 955 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 SPATS1Q496A3 300 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 FAM111BQ6SJ93 734 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 BTNL9Q6UXG8 535 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 Q6ZSN1 163 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 POLNQ7Z5Q5 900 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 GLB1L3Q8NCI6 653 aaPredicted RBP4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 C1orf162Q8NEQ5 155 aaPredicted RBP4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 SNX33Q8WV41 574 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 DDX17Q92841 729 aaKnown RBP4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 FAXDC2Q96IV6 333 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 PRAM1Q96QH2 718 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 TCF25Q9BQ70 676 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 ACE2Q9BYF1 805 aaPredicted RBP4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 MKS1Q9NXB0 559 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 GPR45Q9Y5Y3 372 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 QRICH2Q9H0J4 1663 aa4.8□□□□□ -1.64
CKS1BP3-201ENST00000600888 SBNO1A3KN83 1393 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 NCANO14594 1321 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 SPATA31A3Q5VYP0 1347 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 RPTORQ8N122 1335 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 NRP1O14786 923 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 PRAMEF4O60810 478 aa4.79□□□□□ -1.64
CKS1BP3-201ENST00000600888 MT-CO1P00395 513 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms