RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 FAM170BA6NMN3 283 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 CDKL5O76039 1030 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 CSTF1Q05048 431 aaKnown RBP16.56■□□□□ 0.24
XRCC1-209ENST00000599693 ELAVL2Q12926 359 aaKnown RBP16.56■□□□□ 0.24
XRCC1-209ENST00000599693 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 CEP57Q86XR8 500 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 NPAS3Q8IXF0 933 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 GPR161Q8N6U8 529 aaKnown RBP16.56■□□□□ 0.24
XRCC1-209ENST00000599693 SLC7A14Q8TBB6 771 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 KXD1Q9BQD3 176 aa16.56■□□□□ 0.24
XRCC1-209ENST00000599693 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 PTGESO14684 152 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 ADAM12O43184 909 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 XBP1P17861 261 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 SDHBP21912 280 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 RARRES1P49788 294 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 EARS2Q5JPH6 523 aaKnown RBP16.55■□□□□ 0.24
XRCC1-209ENST00000599693 AXDND1Q5T1B0 1012 aaPredicted RBP16.55■□□□□ 0.24
XRCC1-209ENST00000599693 ZBTB44Q8NCP5 570 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 ATRIPQ8WXE1 791 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 PRIMPOLQ96LW4 560 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 HSD17B14Q9BPX1 270 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 PRMT7Q9NVM4 692 aaPredicted RBP16.55■□□□□ 0.24
XRCC1-209ENST00000599693 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 ZSCAN32Q9NX65 697 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 KCNH3Q9ULD8 1083 aa16.55■□□□□ 0.24
XRCC1-209ENST00000599693 SMG5Q9UPR3 1016 aaKnown RBP16.55■□□□□ 0.24
XRCC1-209ENST00000599693 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
XRCC1-209ENST00000599693 LRRIQ4A6NIV6 560 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 USO1O60763 962 aaKnown RBP16.54■□□□□ 0.24
XRCC1-209ENST00000599693 THP07101 528 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 CD72P21854 359 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 RAB33AQ14088 237 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 NAB2Q15742 525 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 UVSSAQ2YD98 709 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
XRCC1-209ENST00000599693 ZBTB41Q5SVQ8 909 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
XRCC1-209ENST00000599693 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.54■□□□□ 0.24
XRCC1-209ENST00000599693 SECISBP2LQ93073 1101 aaKnown RBP16.54■□□□□ 0.24
XRCC1-209ENST00000599693 CLDN23Q96B33 292 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 EPC1Q9H2F5 836 aa16.54■□□□□ 0.24
XRCC1-209ENST00000599693 DNMT3BQ9UBC3 853 aaKnown RBP16.54■□□□□ 0.24
XRCC1-209ENST00000599693 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 N4BP3O15049 544 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 LILRB5O75023 590 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 RECQL4O94761 1208 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 TARSP26639 723 aaKnown RBP16.53■□□□□ 0.24
XRCC1-209ENST00000599693 RPS9P46781 194 aaKnown RBP16.53■□□□□ 0.24
XRCC1-209ENST00000599693 FAM187BQ17R55 369 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 TPRG1Q6ZUI0 275 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 RTL10Q7L3V2 364 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 PIGOQ8TEQ8 1089 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 ING5Q8WYH8 240 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 NELL1Q92832 810 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 CNTNAP3BQ96NU0 1288 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 NELL2Q99435 816 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 CNTNAP3Q9BZ76 1288 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 PDZD7Q9H5P4 517 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 GPRC5CQ9NQ84 441 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 SNTG2Q9NY99 539 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 PCDHA12Q9UN75 941 aa16.53■□□□□ 0.24
XRCC1-209ENST00000599693 TPRP12270 2363 aaKnown RBP16.53■□□□□ 0.24
XRCC1-209ENST00000599693 NCAM2O15394 837 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 ECI2O75521 394 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 FGFR3P22607 806 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 OR1D2P34982 312 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 LMNB2Q03252 620 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 SCRN1Q12765 414 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 CALCRLQ16602 461 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 CXCL16Q9H2A7 254 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 FZD8Q9H461 694 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 PRMT8Q9NR22 394 aaPredicted RBP16.52■□□□□ 0.24
XRCC1-209ENST00000599693 MTRRQ9UBK8 725 aa16.52■□□□□ 0.24
XRCC1-209ENST00000599693 MRPS23Q9Y3D9 190 aaKnown RBP16.52■□□□□ 0.24
XRCC1-209ENST00000599693 SPTBN2O15020 2390 aa16.52■□□□□ 0.23
XRCC1-209ENST00000599693 ACACBO00763 2458 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 TTLL13PA6NNM8 815 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 PRR5-ARHGAP8B1AHC4 643 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 TMEM189-UBE2V1I3L0A0 370 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 EPB41L2O43491 1005 aaKnown RBP16.51■□□□□ 0.23
XRCC1-209ENST00000599693 ATXN1P54253 815 aaKnown RBP16.51■□□□□ 0.23
XRCC1-209ENST00000599693 ARHGAP8P85298 464 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 NR5A1Q13285 461 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 MAEAQ7L5Y9 396 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 MCPH1Q8NEM0 835 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 C2orf40Q9H1Z8 148 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 TTC12Q9H892 705 aaPredicted RBP16.51■□□□□ 0.23
XRCC1-209ENST00000599693 PDRG1Q9NUG6 133 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 GDE1Q9NZC3 331 aa16.51■□□□□ 0.23
XRCC1-209ENST00000599693 CDV3Q9UKY7 258 aaKnown RBP16.51■□□□□ 0.23
XRCC1-209ENST00000599693 A0A087WWV3 80 aa16.5■□□□□ 0.23
XRCC1-209ENST00000599693 TBC1D4O60343 1298 aa16.5■□□□□ 0.23
XRCC1-209ENST00000599693 RHOP08100 348 aa16.5■□□□□ 0.23
XRCC1-209ENST00000599693 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms