RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 FTOQ9C0B1 505 aaKnown RBP eCLIP6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 PHACTR1Q9C0D0 580 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 BRD8Q9H0E9 1235 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 OCEL1Q9H607 264 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 DHX33Q9H6R0 707 aaKnown RBP6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 TMEM165Q9HC07 324 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 ZNF304Q9HCX3 659 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 BATF3Q9NR55 127 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 LCMT1Q9UIC8 334 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 TRPV2Q9Y5S1 764 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 CDY2AQ9Y6F7 541 aa6.62□□□□□ -1.35
PPP4R1-223ENST00000582933 ABHD14A-ACY1A0A1B0GW23 586 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 VWA3AA6NCI4 1184 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 PP2D1A8MPX8 630 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 EIF3CLB5ME19 914 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 SOX1O00570 391 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ATP8B1O43520 1251 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 EFCAB14O75071 495 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 TBCAO75347 108 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 MAFO75444 373 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 MED24O75448 989 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ZNF189O75820 626 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 FGBP02675 491 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 VTNP04004 478 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 RPSAP08865 295 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ZSCAN22P10073 491 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 RRM1P23921 792 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 RPL13P26373 211 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 TMOD1P28289 359 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 RANBP1P43487 201 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 RARRES1P49788 294 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 PAPOLAP51003 745 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 FXR1P51114 621 aaKnown RBP eCLIP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 POLGP54098 1239 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 NPEPPSP55786 919 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 SLC8A3P57103 927 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ZNF445P59923 1031 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CTAG1AP78358 180 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 SMAD3P84022 425 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 FOXK1P85037 733 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 NCBP1Q09161 790 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 TMEM62Q0P6H9 643 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 DRP2Q13474 957 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 PKP1Q13835 747 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 DHX8Q14562 1220 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 EMC2Q15006 297 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 IL17AQ16552 155 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 LONRF1Q17RB8 773 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 KIZQ2M2Z5 673 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 LRRC23Q53EV4 343 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 XKR9Q5GH70 373 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 FBXO47Q5MNV8 452 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 OLFML1Q6UWY5 402 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 DTHD1Q6ZMT9 781 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 NEK10Q6ZWH5 1172 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 OTOP2Q7RTS6 562 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ARHGAP22Q7Z5H3 698 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CATSPER3Q86XQ3 398 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 LRRC71Q8N4P6 559 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 USP38Q8NB14 1042 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CCDC150Q8NCX0 1101 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 SNX29Q8TEQ0 813 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ZFPM2Q8WW38 1151 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 TMEM40Q8WWA1 233 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 SEPT8Q92599 483 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 APBB2Q92870 758 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ERP27Q96DN0 273 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CEP170P1Q96L14 293 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CCDC114Q96M63 670 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 AK8Q96MA6 479 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CCDC43Q96MW1 224 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 EIF3CQ99613 913 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 SH2D3AQ9BRG2 576 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 IFIH1Q9BYX4 1025 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CELF4Q9BZC1 486 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 OSBPL7Q9BZF2 842 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 XPO4Q9C0E2 1151 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 ANKEF1Q9NU02 776 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CXXC1Q9P0U4 656 aaPredicted RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 LRWD1Q9UFC0 647 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 DBR1Q9UK59 544 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 AKT3Q9Y243 479 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 LUC7L2Q9Y383 392 aaKnown RBP6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 TTLL3Q9Y4R7 772 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 SQORQ9Y6N5 450 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 CDH23Q9H251 3354 aa6.61□□□□□ -1.35
PPP4R1-223ENST00000582933 TRANK1O15050 2925 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 LRRC10BA6NIK2 292 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 ZBBXA8MT70 800 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 SLC26A4O43511 780 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 GPR32O75388 356 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 DGAT1O75907 488 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 FGFR1OPO95684 399 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 F13A1P00488 732 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 RBP3P10745 1247 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 ATP2A2P16615 1042 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 PSMA3P25788 255 aa6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 LONP1P36776 959 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 CCT6AP40227 531 aaKnown RBP6.6□□□□□ -1.35
PPP4R1-223ENST00000582933 MATR3P43243 847 aaKnown RBP eCLIP6.6□□□□□ -1.359e-6■■■■□ 21.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms