RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ADAM9Q13443 819 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 SURF1Q15526 300 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 SNRNP35Q16560 246 aaKnown RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 ANO6Q4KMQ2 910 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 SPATA1Q5VX52 437 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 KLHL10Q6JEL2 608 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 CRELD2Q6UXH1 353 aaPredicted RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 ALKAL1Q6UXT8 129 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 C11orf57Q6ZUT1 292 aaPredicted RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 USP37Q86T82 979 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 CDR2LQ86X02 465 aaPredicted RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 BRSK2Q8IWQ3 736 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 CSGALNACT2Q8N6G5 542 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 ACAP3Q96P50 834 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 MED15Q96RN5 788 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 DNAJC25Q9H1X3 360 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 IKZF4Q9H2S9 585 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 THAP9Q9H5L6 903 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 METTL14Q9HCE5 456 aaKnown RBP11.32□□□□□ -0.6
CCDC47-203ENST00000580986 CNTN3Q9P232 1028 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 FRMD4BQ9Y2L6 1034 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 DERAQ9Y315 318 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 PTPRSQ13332 1948 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 ANK1P16157 1881 aa11.32□□□□□ -0.6
CCDC47-203ENST00000580986 A0A1W2PPC1 479 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 H0YGN5 161 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 CLIC2O15247 247 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 EXOC3O60645 756 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 RECQL4O94761 1208 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 NUDT7P0C024 238 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 EPB41P11171 864 aaKnown RBP11.31□□□□□ -0.6
CCDC47-203ENST00000580986 ITGA4P13612 1032 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 KCNE1P15382 129 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 CLDN10P78369 228 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
CCDC47-203ENST00000580986 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 ZBTB33Q86T24 672 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 CEP120Q8N960 986 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 SNX27Q96L92 541 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 MFSD14AQ96MC6 490 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 PRO3102Q9H379 93 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
CCDC47-203ENST00000580986 RSAD1Q9HA92 442 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 RC3H2Q9HBD1 1191 aaKnown RBP11.31□□□□□ -0.6
CCDC47-203ENST00000580986 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 C2CD2Q9Y426 696 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 PDE4DIPQ5VU43 2346 aa11.31□□□□□ -0.6
CCDC47-203ENST00000580986 FNDC1Q4ZHG4 1894 aaPredicted RBP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 SMTNL1A8MU46 457 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 DGKIO75912 1065 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 AKAP3O75969 853 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 GJB5O95377 273 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 CYP2J2P51589 502 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 AP3M2P53677 418 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 HTRA4P83105 476 aaPredicted RBP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 PPP2R3AQ06190 1150 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 PSMD6Q15008 389 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 FRMD5Q7Z6J6 570 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 FAM114A1Q8IWE2 563 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 THNSL1Q8IYQ7 743 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 FAM200AQ8TCP9 573 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 ZNF689Q96CS4 500 aaPredicted RBP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 BORCS6Q96GS4 357 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 FAM213AQ9BRX8 229 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 MRPL9Q9BYD2 267 aaKnown RBP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 UBE2OQ9C0C9 1292 aaKnown RBP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 TMEM117Q9H0C3 514 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 TSPY26PQ9H489 355 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 RNF19AQ9NV58 838 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 RBAKQ9NYW8 714 aaPredicted RBP11.3□□□□□ -0.6
CCDC47-203ENST00000580986 LRFN2Q9ULH4 789 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 SLC4A7Q9Y6M7 1214 aa11.3□□□□□ -0.6
CCDC47-203ENST00000580986 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 XPOTO43592 962 aaKnown RBP11.29□□□□□ -0.6
CCDC47-203ENST00000580986 OFD1O75665 1012 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CXCL8P10145 99 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CYP3A5P20815 502 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 TNFSF9P41273 254 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 ACOT2P49753 483 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 STX17P56962 302 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 DEFB103AP81534 67 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 SPAG1Q07617 926 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CYP24A1Q07973 514 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 BFSP1Q12934 665 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 GRIK3Q13003 919 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 NCAPHQ15003 741 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 IQCB1Q15051 598 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 ZBTB6Q15916 424 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms