RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 BCAR1P56945 870 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 GRIK3Q13003 919 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 GPM6BQ13491 265 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 BMT2Q1RMZ1 405 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 LCE2DQ5TA82 110 aaPredicted RBP16.79■□□□□ 0.28
IFT20-206ENST00000578122 KCNT2Q6UVM3 1135 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 ERCC4Q92889 916 aaPredicted RBP16.79■□□□□ 0.28
IFT20-206ENST00000578122 SMARCE1Q969G3 411 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 C11orf84Q9BUA3 381 aaPredicted RBP16.79■□□□□ 0.28
IFT20-206ENST00000578122 CXCL16Q9H2A7 254 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 RMND1Q9NWS8 449 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 AGO2Q9UKV8 859 aaKnown RBP16.79■□□□□ 0.28
IFT20-206ENST00000578122 PCDHA5Q9Y5H7 936 aa16.79■□□□□ 0.28
IFT20-206ENST00000578122 PLXNA4Q9HCM2 1894 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 H3BNC9 293 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 PTGESO14684 152 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 FAM189A1O60320 539 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 B4GALT3O60512 393 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 ZC3H11AO75152 810 aaKnown RBP eCLIP16.78■□□□□ 0.28
IFT20-206ENST00000578122 THP07101 528 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 GARTP22102 1010 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 PBX3P40426 434 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 TNFSF9P41273 254 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 ALDH7A1P49419 539 aaKnown RBP16.78■□□□□ 0.28
IFT20-206ENST00000578122 KNOP1Q1ED39 458 aaKnown RBP16.78■□□□□ 0.28
IFT20-206ENST00000578122 SLC10A6Q3KNW5 377 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 ALKAL1Q6UXT8 129 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 KLHL23Q8NBE8 558 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 MYLIPQ8WY64 445 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 P2RX5Q93086 422 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 SNX27Q96L92 541 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 GSDMAQ96QA5 445 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 GAS2L1Q99501 681 aaPredicted RBP16.78■□□□□ 0.28
IFT20-206ENST00000578122 TMEM175Q9BSA9 504 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 RPF1Q9H9Y2 349 aaKnown RBP16.78■□□□□ 0.28
IFT20-206ENST00000578122 SPG21Q9NZD8 308 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 DNAJB4Q9UDY4 337 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 PLAGL2Q9UPG8 496 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 ANK1P16157 1881 aa16.78■□□□□ 0.28
IFT20-206ENST00000578122 CARNS1A5YM72 827 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 TGFB1I1O43294 461 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 ALDH2P05091 517 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 GALTP07902 379 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 CXCL8P10145 99 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 SLC11A1P49279 550 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 ACOT2P49753 483 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 DSC1Q08554 894 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 XKR4Q5GH76 650 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 COLGALT2Q8IYK4 626 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 SPATA20Q8TB22 786 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 PCIF1Q9H4Z3 704 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 PLEKHA5Q9HAU0 1116 aa16.77■□□□□ 0.28
IFT20-206ENST00000578122 CPSF3Q9UKF6 684 aaKnown RBP16.77■□□□□ 0.28
IFT20-206ENST00000578122 SMIM28A0A1B0GU29 152 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 NT5C1B-RDH14C9J2C7 533 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 GRM6O15303 877 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 MEFVO15553 781 aaPredicted RBP16.76■□□□□ 0.27
IFT20-206ENST00000578122 LPXNO60711 386 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 FGF18O76093 207 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
IFT20-206ENST00000578122 ITGB1P05556 798 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 IGFBP4P22692 258 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 PPM1AP35813 382 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 OR1G1P47890 313 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
IFT20-206ENST00000578122 ADGRE1Q14246 886 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 ENOX2Q16206 610 aaKnown RBP16.76■□□□□ 0.27
IFT20-206ENST00000578122 GLRA4Q5JXX5 417 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 HS2ST1Q7LGA3 356 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 SLC39A11Q8N1S5 342 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 PDCD7Q8N8D1 485 aaKnown RBP16.76■□□□□ 0.27
IFT20-206ENST00000578122 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 PPP1R10Q96QC0 940 aaKnown RBP16.76■□□□□ 0.27
IFT20-206ENST00000578122 AGPAT3Q9NRZ7 376 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 CNTN3Q9P232 1028 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 CGNQ9P2M7 1197 aaKnown RBP16.76■□□□□ 0.27
IFT20-206ENST00000578122 FAN1Q9Y2M0 1017 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 LAMA3Q16787 3333 aa16.76■□□□□ 0.27
IFT20-206ENST00000578122 TTC26A0AVF1 554 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 LACTBL1A8MY62 500 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 KIAA0391O15091 583 aaKnown RBP16.75■□□□□ 0.27
IFT20-206ENST00000578122 EXTL3O43909 919 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 KIF20AO95235 890 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 KCNE1P15382 129 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 PPP2R3AQ06190 1150 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 TUSC3Q13454 348 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 CRELD2Q6UXH1 353 aaPredicted RBP16.75■□□□□ 0.27
IFT20-206ENST00000578122 ZSWIM2Q8NEG5 633 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 SPPL3Q8TCT6 385 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 NOC3LQ8WTT2 800 aaKnown RBP16.75■□□□□ 0.27
IFT20-206ENST00000578122 ZMAT2Q96NC0 199 aaKnown RBP16.75■□□□□ 0.27
IFT20-206ENST00000578122 FAM213AQ9BRX8 229 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 GTPBP4Q9BZE4 634 aaKnown RBP16.75■□□□□ 0.27
IFT20-206ENST00000578122 LMAN2LQ9H0V9 348 aa16.75■□□□□ 0.27
IFT20-206ENST00000578122 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
IFT20-206ENST00000578122 MAN1B1Q9UKM7 699 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms