RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 LRRC15Q8TF66 581 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 IFT74Q96LB3 600 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 PHOX2BQ99453 314 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 GPR62Q9BZJ7 368 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 FZD8Q9H461 694 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 PARP2Q9UGN5 583 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 A0A087X0B3 334 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 A0A1B0GVL5 298 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 TEX28O15482 410 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 SOD2P04179 222 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 PFKFB1P16118 471 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 VCPP55072 806 aaKnown RBP17.2■□□□□ 0.34
USB1-208ENST00000563207 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
USB1-208ENST00000563207 ARSHQ5FYA8 562 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 EEF1DP3Q658K8 133 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 CDCA2Q69YH5 1023 aaPredicted RBP17.2■□□□□ 0.34
USB1-208ENST00000563207 ALYREFQ86V81 257 aaKnown RBP17.2■□□□□ 0.34
USB1-208ENST00000563207 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 KREMEN2Q8NCW0 462 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 PRSS33Q8NF86 280 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 RSPH1Q8WYR4 309 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 CCDC51Q96ER9 411 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 RUSC1Q9BVN2 902 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 TRIM6Q9C030 488 aaPredicted RBP17.2■□□□□ 0.34
USB1-208ENST00000563207 PDZD7Q9H5P4 517 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 UBN1Q9NPG3 1134 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 MRPL17Q9NRX2 175 aaKnown RBP17.2■□□□□ 0.34
USB1-208ENST00000563207 KBTBD4Q9NVX7 518 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 LIMD1Q9UGP4 676 aa17.2■□□□□ 0.34
USB1-208ENST00000563207 HIP1RO75146 1068 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 RPL17P18621 184 aaKnown RBP17.19■□□□□ 0.34
USB1-208ENST00000563207 SCP2P22307 547 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 MTHFRP42898 656 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 SYKP43405 635 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 NAMPTP43490 491 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 NHLH1Q02575 133 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 SIGLEC14Q08ET2 396 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 GIT2Q14161 759 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 KIAA1841Q6NSI8 718 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 BMP8AQ7Z5Y6 402 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 GLYCTKQ8IVS8 523 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 CEP57L1Q8IYX8 460 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 FSIP1Q8NA03 581 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 HASPINQ8TF76 798 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 DHX58Q96C10 678 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 MFSD14AQ96MC6 490 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 RPS6KC1Q96S38 1066 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 HERC2P3Q9BVR0 1158 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 CCDC113Q9H0I3 377 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 C2orf40Q9H1Z8 148 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 SNTG2Q9NY99 539 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 LARSQ9P2J5 1176 aaKnown RBP17.19■□□□□ 0.34
USB1-208ENST00000563207 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 PHLPP2Q6ZVD8 1323 aa17.19■□□□□ 0.34
USB1-208ENST00000563207 PTGESO14684 152 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
USB1-208ENST00000563207 SLFN14P0C7P3 912 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
USB1-208ENST00000563207 DHX8Q14562 1220 aaKnown RBP17.18■□□□□ 0.34
USB1-208ENST00000563207 ATAT1Q5SQI0 421 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 CNNM4Q6P4Q7 775 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 GPR149Q86SP6 731 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 ZBTB33Q86T24 672 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 RIPOR3Q96MK2 946 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 NTPCRQ9BSD7 190 aaKnown RBP17.18■□□□□ 0.34
USB1-208ENST00000563207 EMILIN2Q9BXX0 1053 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 MAN1C1Q9NR34 630 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 DZANK1Q9NVP4 752 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 NR2E1Q9Y466 385 aa17.18■□□□□ 0.34
USB1-208ENST00000563207 TRIP11Q15643 1979 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 CASTOR2A6NHX0 329 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 H0YCG3 227 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 N4BP1O75113 896 aaKnown RBP17.17■□□□□ 0.34
USB1-208ENST00000563207 RFPL2O75678 378 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 MYL1P05976 194 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 URODP06132 367 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 ABCD1P33897 745 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 GLUD2P49448 558 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 NDUFA8P51970 172 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 ZNF131P52739 623 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 SMTNP53814 917 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 DMP1Q13316 513 aaPredicted RBP17.17■□□□□ 0.34
USB1-208ENST00000563207 NT5DC1Q5TFE4 455 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 PRSS55Q6UWB4 352 aaPredicted RBP17.17■□□□□ 0.34
USB1-208ENST00000563207 PALB2Q86YC2 1186 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 ZBTB8OSQ8IWT0 167 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 DAW1Q8N136 415 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 FBXL6Q8N531 539 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 SPIRE2Q8WWL2 714 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 DDX12PQ92771 950 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 NECTIN4Q96NY8 510 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 REEP2Q9BRK0 252 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 SFXN1Q9H9B4 322 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 CHST7Q9NS84 486 aa17.17■□□□□ 0.34
USB1-208ENST00000563207 PRMT7Q9NVM4 692 aaPredicted RBP17.17■□□□□ 0.34
USB1-208ENST00000563207 MYMKA6NI61 221 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms