RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 SNRPA1P09661 255 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 ATP5JP18859 108 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 EDNRBP24530 442 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 PEX2P28328 305 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 SREBF1P36956 1147 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 KCNJ5P48544 419 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 GZMKP49863 264 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 NEK3P51956 506 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 MAP2K6P52564 334 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 HK3P52790 923 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 AK2P54819 239 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 RAB1AP62820 205 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 HHEXQ03014 270 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 POLD3Q15054 466 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 CNN3Q15417 329 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 IL31Q6EBC2 164 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 LARP4Q71RC2 724 aaKnown RBP eCLIP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 MAEAQ7L5Y9 396 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 OVCH2Q7RTZ1 564 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 BCL6BQ8N143 479 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 FAM43AQ8N2R8 423 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 MSL3Q8N5Y2 521 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 NLGN4YQ8NFZ3 816 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 MDM1Q8TC05 714 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 NSUN6Q8TEA1 469 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 TEPSINQ96N21 525 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 MYD88Q99836 296 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 ELAC2Q9BQ52 826 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 PACSIN1Q9BY11 444 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 LDAHQ9H6V9 325 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 KIAA1586Q9HCI6 787 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 PIH1D1Q9NWS0 290 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 TRPS1Q9UHF7 1281 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 PAXBP1Q9Y5B6 917 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 PCDHA3Q9Y5H8 950 aa4.32□□□□□ -1.72
CTDSPL2-211ENST00000561189 ZNF536O15090 1300 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 A0A1B0GTL3 188 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 RHPN2P1A8MT19 583 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 B5MCH6 92 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 PMM2O15305 246 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 ADCY6O43306 1168 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 NOBOXO60393 691 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 CDC14BO60729 498 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 GNAT2P19087 354 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 RPS19P39019 145 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 CASRP41180 1078 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 FLT3LGP49771 235 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 ADCY7P51828 1080 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 USP14P54578 494 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 CTXN1P60606 82 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 SATB1Q01826 763 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 BTKQ06187 659 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 NFYCQ13952 458 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 SEPT2Q15019 361 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 ZRSR2Q15696 482 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 KHDC1LQ5JSQ8 128 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 MFSD5Q6N075 450 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 ZNF761Q86XN6 746 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 TRMT2AQ8IZ69 625 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 ZDHHC14Q8IZN3 488 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 ADGRG2Q8IZP9 1017 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 GIMAP8Q8ND71 665 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 SHCBP1Q8NEM2 672 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 PMM1Q92871 262 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 RAB24Q969Q5 203 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 SUCLG2Q96I99 432 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 VRK1Q99986 396 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 REXO4Q9GZR2 422 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 C11orf54Q9H0W9 315 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 NELFAQ9H3P2 528 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 ZNF287Q9HBT7 754 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 PNPLA8Q9NP80 782 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 IL23AQ9NPF7 189 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 NLRC4Q9NPP4 1024 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 DDX21Q9NR30 783 aaKnown RBP eCLIP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 CPA4Q9UI42 421 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 L1RE1Q9UN81 338 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 RUVBL1Q9Y265 456 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 PTPN22Q9Y2R2 807 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 PCDHB1Q9Y5F3 818 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 PCDHGB6Q9Y5F9 930 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 SLC4A7Q9Y6M7 1214 aa4.31□□□□□ -1.72
CTDSPL2-211ENST00000561189 PMS2P1A4D2B8 440 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 PRR5-ARHGAP8B1AHC4 643 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 APAF1O14727 1248 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 KIAA0391O15091 583 aaKnown RBP4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 MFAP3LO75121 409 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 IPO13O94829 963 aaKnown RBP4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 CD1AP06126 327 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 MYL3P08590 195 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 INHBBP09529 407 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 TYRP14679 529 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 BRAFP15056 766 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 MALP21145 153 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 SLC7A1P30825 629 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 AGFG1P52594 562 aaKnown RBP4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 DSC2Q02487 901 aa4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 HABP2Q14520 560 aaPredicted RBP4.3□□□□□ -1.72
CTDSPL2-211ENST00000561189 VPS72Q15906 364 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms