RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 POMCP01189 267 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 NR3C1P04150 777 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 ADRB2P07550 413 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 CYP2J2P51589 502 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 PPP2R3AQ06190 1150 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 BRSK2Q8IWQ3 736 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 XXYLT1Q8NBI6 393 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 DHTKD1Q96HY7 919 aaPredicted RBP23.6■■□□□ 1.37
SNX1-206ENST00000559389 LRCH3Q96II8 777 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 FBXL18Q96ME1 805 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 CWH43Q9H720 699 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 PLEKHA5Q9HAU0 1116 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 MIOSQ9NXC5 875 aa23.6■■□□□ 1.37
SNX1-206ENST00000559389 B4GALT3O60512 393 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 KCNE1P15382 129 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 DSC1Q08554 894 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 MYBPC2Q14324 1141 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 NFKBIBQ15653 356 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 EDRF1Q3B7T1 1238 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 GLRA4Q5JXX5 417 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 SPRED2Q7Z698 418 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 P2RX5Q93086 422 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 PPP1R10Q96QC0 940 aaKnown RBP23.59■■□□□ 1.37
SNX1-206ENST00000559389 SLC28A3Q9HAS3 691 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 KIAA1586Q9HCI6 787 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 DMAC2Q9NW81 257 aa23.59■■□□□ 1.37
SNX1-206ENST00000559389 COL4A4P53420 1690 aaPredicted RBP23.58■■□□□ 1.37
SNX1-206ENST00000559389 LAG3P18627 525 aa23.58■■□□□ 1.37
SNX1-206ENST00000559389 CCNE1P24864 410 aa23.58■■□□□ 1.37
SNX1-206ENST00000559389 PMS1P54277 932 aaKnown RBP23.58■■□□□ 1.37
SNX1-206ENST00000559389 RNASELQ05823 741 aaKnown RBP23.58■■□□□ 1.37
SNX1-206ENST00000559389 HSP90AA2PQ14568 343 aaPredicted RBP23.58■■□□□ 1.37
SNX1-206ENST00000559389 DPCR1Q3MIW9 517 aa23.58■■□□□ 1.37
SNX1-206ENST00000559389 CBWD2Q8IUF1 395 aa23.58■■□□□ 1.37
SNX1-206ENST00000559389 ZMAT2Q96NC0 199 aaKnown RBP23.58■■□□□ 1.37
SNX1-206ENST00000559389 NRDE2Q9H7Z3 1164 aa23.58■■□□□ 1.37
SNX1-206ENST00000559389 RBAKQ9NYW8 714 aaPredicted RBP23.58■■□□□ 1.37
SNX1-206ENST00000559389 RWDD3Q9Y3V2 267 aa23.58■■□□□ 1.37
SNX1-206ENST00000559389 SMIM28A0A1B0GU29 152 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 DDHD2O94830 711 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 THP07101 528 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 NR2F2P24468 414 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 NLRP12P59046 1061 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 ERVK-21P61565 698 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 LRRC63Q05C16 580 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 NAB2Q15742 525 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 KLHL10Q6JEL2 608 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 FOXR2Q6PJQ5 311 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 ZNF280BQ86YH2 543 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 CD302Q8IX05 232 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 MLKLQ8NB16 471 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 NOC3LQ8WTT2 800 aaKnown RBP23.57■■□□□ 1.36
SNX1-206ENST00000559389 SAMD11Q96NU1 681 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 TGS1Q96RS0 853 aaKnown RBP23.57■■□□□ 1.36
SNX1-206ENST00000559389 TSG101Q99816 390 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 C17orf80Q9BSJ5 609 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 CTNND2Q9UQB3 1225 aa23.57■■□□□ 1.36
SNX1-206ENST00000559389 TRIP11Q15643 1979 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 TRIM49BA6NDI0 452 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 LACTBL1A8MY62 500 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 EXOC3O60645 756 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 ZC3H11AO75152 810 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNX1-206ENST00000559389 WNT7BP56706 349 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 PAK1Q13153 545 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 SNRNP35Q16560 246 aaKnown RBP23.56■■□□□ 1.36
SNX1-206ENST00000559389 SKOR2Q2VWA4 1001 aaPredicted RBP23.56■■□□□ 1.36
SNX1-206ENST00000559389 ZC3H3Q8IXZ2 948 aaKnown RBP23.56■■□□□ 1.36
SNX1-206ENST00000559389 COLGALT2Q8IYK4 626 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 COLGALT1Q8NBJ5 622 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 NELFBQ8WX92 580 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 ASB7Q9H672 318 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 DNAJB4Q9UDY4 337 aa23.56■■□□□ 1.36
SNX1-206ENST00000559389 ZNF233A6NK53 670 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 IL18RAPO95256 599 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 CTNNB1P35222 781 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 TUSC3Q13454 348 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 SPOUT1Q5T280 376 aaKnown RBP23.55■■□□□ 1.36
SNX1-206ENST00000559389 ANKRD40Q6AI12 368 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 TTI2Q6NXR4 508 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 TSPAN18Q96SJ8 248 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 TMEM175Q9BSA9 504 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 AAASQ9NRG9 546 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 SLC38A7Q9NVC3 462 aa23.55■■□□□ 1.36
SNX1-206ENST00000559389 C5orf67F2Z3F1 127 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 NFICP08651 508 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 RPL13P26373 211 aaKnown RBP23.54■■□□□ 1.36
SNX1-206ENST00000559389 BCAR1P56945 870 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 EPC2Q52LR7 807 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 JADE1Q6IE81 842 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 GPR153Q6NV75 609 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 FAM212AQ96EL1 285 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 KIF12Q96FN5 646 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 ZNF558Q96NG5 402 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 FAM193BQ96PV7 902 aaPredicted RBP23.54■■□□□ 1.36
SNX1-206ENST00000559389 TTYH1Q9H313 450 aaPredicted RBP23.54■■□□□ 1.36
SNX1-206ENST00000559389 ZNF576Q9H609 170 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 DERAQ9Y315 318 aa23.54■■□□□ 1.36
SNX1-206ENST00000559389 BICDL2A1A5D9 508 aa23.53■■□□□ 1.36
SNX1-206ENST00000559389 BMPR1AP36894 532 aa23.53■■□□□ 1.36
SNX1-206ENST00000559389 PBX3P40426 434 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms