RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	CBX8	Q9HC52	389 aa		13.59	□□□□□ -0.23
ABCD4-223	ENST00000555904	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCD4-223	ENST00000555904	ARL5C	A6NH57	179 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	XPOT	O43592	962 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	DLAT	P10515	647 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	FGFR1	P11362	822 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	ATP2A2	P16615	1042 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	ATF7	P17544	494 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	EEF1G	P26641	437 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	MTIF2	P46199	727 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	VAMP7	P51809	220 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	DEFB103A	P81534	67 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	RNASEL	Q05823	741 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	CYP24A1	Q07973	514 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	BFSP1	Q12934	665 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	PSMD6	Q15008	389 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	TCERG1L	Q5VWI1	586 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	FRMD5	Q7Z6J6	570 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	ZNF598	Q86UK7	904 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	LUZP1	Q86V48	1076 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	DHX40	Q8IX18	779 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	TMEM192	Q8IY95	271 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	RNF214	Q8ND24	703 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	PHOSPHO2	Q8TCD6	241 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	HELQ	Q8TDG4	1101 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	TOP1MT	Q969P6	601 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	MED15	Q96RN5	788 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	GAD1	Q99259	594 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	MRPL9	Q9BYD2	267 aa	Known RBP	13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	RNF39	Q9H2S5	420 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	ASB7	Q9H672	318 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	SLC38A7	Q9NVC3	462 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	FANCL	Q9NW38	375 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	KLK14	Q9P0G3	267 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	KANSL3	Q9P2N6	904 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	INPP5F	Q9Y2H2	1132 aa		13.58	□□□□□ -0.24
ABCD4-223	ENST00000555904	TTC26	A0AVF1	554 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	KCNJ18	B7U540	433 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	ADRB2	P07550	413 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	TNNI1	P19237	187 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	TFAM	Q00059	246 aa	Known RBP	13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	ENPEP	Q07075	957 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	KCNJ12	Q14500	433 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	TMEM132D	Q14C87	1099 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	SLC10A6	Q3KNW5	377 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	HSP90AA4P	Q58FG1	418 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	AGMO	Q6ZNB7	445 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	NT5DC4	Q86YG4	428 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	WDR49	Q8IV35	697 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	ZSWIM2	Q8NEG5	633 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	TMC2	Q8TDI7	906 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	CACTIN	Q8WUQ7	758 aa	Known RBP	13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	KIF12	Q96FN5	646 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	MFSD14A	Q96MC6	490 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	ZFP42	Q96MM3	310 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	YME1L1	Q96TA2	773 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	TMEM117	Q9H0C3	514 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	PDE11A	Q9HCR9	933 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	CNTN3	Q9P232	1028 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	DERA	Q9Y315	318 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	C2CD2	Q9Y426	696 aa		13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ABCD4-223	ENST00000555904	MEIS3P2	A8K0S8	358 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	LACTBL1	A8MY62	500 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	RBAK-RBAKDN	I3L0D1	243 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	PES1	O00541	588 aa	Known RBP	13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	TNNC2	P02585	160 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	TH	P07101	528 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	TMEM191B	P0C7N4	346 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	PRKCSH	P14314	528 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	AP3M2	P53677	418 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	MARS	P56192	900 aa	Known RBP	13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	GRIK3	Q13003	919 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	NCAPH	Q15003	741 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	IQCB1	Q15051	598 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	TCP11X2	Q5H9J9	407 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	NOMO2	Q5JPE7	1267 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	CDKAL1	Q5VV42	579 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	JADE1	Q6IE81	842 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	FAM117B	Q6P1L5	589 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	LRRC43	Q8N309	656 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	BEST2	Q8NFU1	509 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	ANKRD36BP1	Q96IX9	119 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	FAM193B	Q96PV7	902 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	CGRRF1	Q99675	332 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	GDF15	Q99988	308 aa		13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	SAMSN1	Q9NSI8	373 aa	Known RBP	13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCD4-223	ENST00000555904	SMIM28	A0A1B0GU29	152 aa		13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	TBKBP1	A7MCY6	615 aa		13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	N4BP1	O75113	896 aa	Known RBP	13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	OFD1	O75665	1012 aa		13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	DGKI	O75912	1065 aa		13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	CLSTN1	O94985	981 aa		13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	GJB5	O95377	273 aa		13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	POMC	P01189	267 aa		13.55	□□□□□ -0.24
ABCD4-223	ENST00000555904	KCNE1	P15382	129 aa		13.55	□□□□□ -0.24

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