RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 PLA2G4FQ68DD2 849 aa14.45□□□□□ -0.1
SHMT2-222ENST00000555774 MFSD5Q6N075 450 aa14.45□□□□□ -0.1
SHMT2-222ENST00000555774 MCPH1Q8NEM0 835 aa14.45□□□□□ -0.1
SHMT2-222ENST00000555774 TAS1R2Q8TE23 839 aa14.45□□□□□ -0.1
SHMT2-222ENST00000555774 ATP6V0A1Q93050 837 aa14.45□□□□□ -0.1
SHMT2-222ENST00000555774 CABS1Q96KC9 395 aa14.45□□□□□ -0.1
SHMT2-222ENST00000555774 ZNRF3Q9ULT6 936 aa14.45□□□□□ -0.1
SHMT2-222ENST00000555774 GOLGA6L7A0A1B0GV03 622 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 TMEM150BA6NC51 233 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 GRIN3BO60391 1043 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 ATP9AO75110 1047 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 SCP2P22307 547 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 CCND2P30279 289 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
SHMT2-222ENST00000555774 LACTB2Q53H82 288 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-222ENST00000555774 BRDTQ58F21 947 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-222ENST00000555774 ARHGEF16Q5VV41 709 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 ANO5Q75V66 913 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 CPLX4Q7Z7G2 160 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 NLRX1Q86UT6 975 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 KIAA1586Q9HCI6 787 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 GHRP10912 638 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 BPIFB4P59827 614 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 QPCTQ16769 361 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 SV2AQ7L0J3 742 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 TAOK1Q7L7X3 1001 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 NIM1KQ8IY84 436 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 GRK7Q8WTQ7 553 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 POMGNT1Q8WZA1 660 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 KCNN1Q92952 543 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 SEMA4AQ9H3S1 761 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 AZI2Q9H6S1 392 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 LRRC4CQ9HCJ2 640 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 COL4A5P29400 1685 aa14.44□□□□□ -0.1
SHMT2-222ENST00000555774 ASAP2O43150 1006 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 DGAT1O75907 488 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 UNGP13051 313 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CHN1P15882 459 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 ITIH2P19823 946 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 MAPK4P31152 587 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CAV1Q03135 178 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 PTP4A2Q12974 167 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 PPP1R7Q15435 360 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 ZNF568Q3ZCX4 644 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 FBXW10Q5XX13 1052 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 SLC39A4Q6P5W5 647 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 ATXN2LQ8WWM7 1075 aaKnown RBP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CEP89Q96ST8 783 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 SH2D3AQ9BRG2 576 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 HOMER2Q9NSB8 354 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 TCRBV7S2A1N4TA0A589 114 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 TESPA1A2RU30 521 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 WNT10BO00744 389 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 RASGRF2O14827 1237 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CTNND1O60716 968 aaKnown RBP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CLDN10P78369 228 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 TNFAIP1Q13829 316 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 SGO2Q562F6 1265 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 PPP1R2P3Q6NXS1 205 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 C15orf39Q6ZRI6 1047 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CCDC13Q8IYE1 715 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 BSNDQ8WZ55 320 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 BTBD6Q96KE9 485 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 SELENOSQ9BQE4 189 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 ADAM7Q9H2U9 754 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 ACP6Q9NPH0 428 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 HOMER3Q9NSC5 361 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 C1orf112Q9NSG2 853 aa14.43□□□□□ -0.1
SHMT2-222ENST00000555774 CHORDC1Q9UHD1 332 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-222ENST00000555774 FAM170AA1A519 330 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 PTK6Q13882 451 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 ITIH4Q14624 930 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 VSIG10LQ86VR7 867 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 MCOLN2Q8IZK6 566 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 ZNF317Q96PQ6 595 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-222ENST00000555774 POP1Q99575 1024 aaKnown RBP14.42□□□□□ -0.1
SHMT2-222ENST00000555774 KIFC3Q9BVG8 833 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 MAF1Q9H063 256 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 KDM4CQ9H3R0 1056 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 PDLIM7Q9NR12 457 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 TOPORSQ9NS56 1045 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-222ENST00000555774 ANAPC7Q9UJX3 599 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 NFASCO94856 1347 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 TNS1Q9HBL0 1735 aaKnown RBP14.42□□□□□ -0.1
SHMT2-222ENST00000555774 TLDC2A0PJX2 215 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 CLDN3O15551 220 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 STBD1O95210 358 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 PSAPP07602 524 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 KRT5P13647 590 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 ATP5DP30049 168 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 CENPCQ03188 943 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 KCTD19Q17RG1 926 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-222ENST00000555774 ANKRD20A8PQ5CZ79 823 aa14.42□□□□□ -0.1
SHMT2-222ENST00000555774 SWT1Q5T5J6 900 aaKnown RBP14.42□□□□□ -0.1
SHMT2-222ENST00000555774 KCNV1Q6PIU1 500 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms