RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ADAMTS1Q9UHI8 967 aa21.14■□□□□ 0.98
RBFOX1-215ENST00000553186 KAT6AQ92794 2004 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 A0A087X0T9 212 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 GPR25O00155 361 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 FOXN3O00409 490 aaPredicted RBP21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 ADAMTS4O75173 837 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 FAM228BP0C875 321 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 RARBP10826 455 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 CCND3P30281 292 aaPredicted RBP21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 HTRA3P83110 453 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 CDC42EP1Q00587 391 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 TMEM62Q0P6H9 643 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 SLC18A3Q16572 532 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 TMEM132AQ24JP5 1023 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 KIAA1328Q86T90 577 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 KREMEN1Q96MU8 473 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 SCLT1Q96NL6 688 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 PDZD7Q9H5P4 517 aa21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.14■□□□□ 0.97
RBFOX1-215ENST00000553186 TSPAN1O60635 241 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 THNSL1Q8IYQ7 743 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 OR5B17Q8NGF7 314 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 CDHR5Q9HBB8 845 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 VNN1O95497 513 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 HOXD10P28358 340 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 OLIG1Q8TAK6 271 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 JAKMIP2Q96AA8 810 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 VTI1AQ96AJ9 217 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 CPB2Q96IY4 423 aa21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 MTG1Q9BT17 334 aaPredicted RBP21.13■□□□□ 0.97
RBFOX1-215ENST00000553186 C17orf102A2RUQ5 167 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 KIF5CO60282 957 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 ZC3H11AO75152 810 aaKnown RBP eCLIP21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 CCDC122Q5T0U0 273 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 MAP3K21Q5TCX8 1036 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 CXCL17Q6UXB2 119 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 WDR49Q8IV35 697 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 FMNL3Q8IVF7 1028 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 PPM1KQ8N3J5 372 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 C7orf31Q8N865 590 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 DNAJB3Q8WWF6 145 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 NT5C1BQ96P26 610 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 SYT11Q9BT88 431 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 PI4K2AQ9BTU6 479 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 SPC25Q9HBM1 224 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 A0A1B0GUA9 196 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 HLA-DRAP01903 254 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 MCF2P10911 925 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 ANXA13P27216 316 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 TMEM192Q8IY95 271 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 TATDN2Q93075 761 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 ELMO3Q96BJ8 720 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 GUCA1BQ9UMX6 200 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 DUSP10Q9Y6W6 482 aa21.12■□□□□ 0.97
RBFOX1-215ENST00000553186 MAGEA1P43355 309 aa21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 OSTNP61366 133 aa21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 SHC3Q92529 594 aa21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 GCOM2Q9BZD3 368 aaPredicted RBP21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 XPNPEP3Q9NQH7 507 aa21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 MYO1AQ9UBC5 1043 aa21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 GINS2Q9Y248 185 aa21.11■□□□□ 0.97
RBFOX1-215ENST00000553186 KRT86O43790 486 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 ERLIN2O94905 339 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 HMGCRP04035 888 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 GNAT1P11488 350 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 FGFR4P22455 802 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 AP3M2P53677 418 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 BIRC3Q13489 604 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 OSMRQ99650 979 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 NENFQ9UMX5 172 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 DNAH12Q6ZR08 3092 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 DARSP14868 501 aaKnown RBP21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 HOXA11P31270 313 aaPredicted RBP21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 MFAP3P55082 362 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 GCNT1Q02742 428 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 KIF5AQ12840 1032 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 SURF1Q15526 300 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 ZNF569Q5MCW4 686 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 FAM71AQ8IYT1 594 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 KLHDC9Q8NEP7 349 aa21.1■□□□□ 0.97
RBFOX1-215ENST00000553186 RIOK3O14730 519 aaKnown RBP21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 MEFVO15553 781 aaPredicted RBP21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 PJA2O43164 708 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 B4GALT4O60513 344 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 CCDC172P0C7W6 258 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 PIK3CAP42336 1068 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 TERF1P54274 439 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 NBPF20Q3BBV1 942 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 SCARA3Q6AZY7 606 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 CCSAPQ6IQ19 270 aaPredicted RBP21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 FAM212AQ96EL1 285 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 TSGA10Q9BZW7 698 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 SCN10AQ9Y5Y9 1956 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 DDX3XO00571 662 aaKnown RBP eCLIP21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 GNRH1P01148 92 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 STAG3L1P0CL83 205 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 CXCL8P10145 99 aa21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 EIF4BP23588 611 aaKnown RBP21.09■□□□□ 0.97
RBFOX1-215ENST00000553186 POU5F1Q01860 360 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms