RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TTC38Q5R3I4 469 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 GRASPQ7Z6J2 395 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 ZBTB8OSQ8IWT0 167 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 HACE1Q8IYU2 909 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 C3orf58Q8NDZ4 430 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 FBXO18Q8NFZ0 1043 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 PRIMPOLQ96LW4 560 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 TTPALQ9BTX7 342 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 BHMT2Q9H2M3 363 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 PIDD1Q9HB75 910 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 FBXW11Q9UKB1 542 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 DMXL1Q9Y485 3027 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 ZNF292O60281 2723 aa12.75□□□□□ -0.37
PRPF40B-212ENST00000551111 ZMYM2Q9UBW7 1377 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 SF3B1O75533 1304 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 E9PMD0 336 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 N4BP3O15049 544 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 MEFVO15553 781 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 NUBP1P53384 320 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 SOX4Q06945 474 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 HTR4Q13639 388 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 PSMD5Q16401 504 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 PARM1Q6UWI2 310 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 TAS1R3Q7RTX0 852 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 CCDC105Q8IYK2 499 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 GPR65Q8IYL9 337 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 DAW1Q8N136 415 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 DTWD2Q8NBA8 298 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 GPR152Q8TDT2 470 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 HDAC7Q8WUI4 952 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 PIK3R5Q8WYR1 880 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 FGF14Q92915 247 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 FOXP1Q9H334 677 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 HCFC1R1Q9NWW0 138 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 ZDHHC7Q9NXF8 308 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 KIAA1024Q9UPX6 916 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 PCDHB6Q9Y5E3 794 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 NUMBLQ9Y6R0 609 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 PATJQ8NI35 1801 aa12.74□□□□□ -0.37
PRPF40B-212ENST00000551111 ANHXE9PGG2 379 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 CCL16O15467 120 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 LRRN2O75325 713 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 NAMPTP43490 491 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 BRCC3P46736 316 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 CLCNKBP51801 687 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 ANGPT1Q15389 498 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 CYP26C1Q6V0L0 522 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 KCNK18Q7Z418 384 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 DEPTORQ8TB45 409 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 ITFG1Q8TB96 612 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 PPP1R10Q96QC0 940 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 IRF2BPLQ9H1B7 796 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 TBC1D17Q9HA65 648 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 DDX19AQ9NUU7 478 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 WNT16Q9UBV4 365 aa12.73□□□□□ -0.37
PRPF40B-212ENST00000551111 STK25O00506 426 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 C8AP07357 584 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 SRFP11831 508 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 GLULP15104 373 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 FGFR3P22607 806 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 FSHRP23945 695 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 TKTP29401 623 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 OR1D2P34982 312 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 OSTNP61366 133 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 GPC5P78333 572 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 MAPK7Q13164 816 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 PTGDRQ13258 359 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 AXDND1Q5T1B0 1012 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 ATF7IP2Q5U623 682 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 SLC7A14Q8TBB6 771 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 STAMQ92783 540 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 ZBTB45Q96K62 511 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 ZMAT2Q96NC0 199 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 MMTAG2Q9BU76 263 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 RUSC1Q9BVN2 902 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 FOXQ1Q9C009 403 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 LRWD1Q9UFC0 647 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 DPP7Q9UHL4 492 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 POLIQ9UNA4 740 aa12.72□□□□□ -0.37
PRPF40B-212ENST00000551111 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 TICRRQ7Z2Z1 1910 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 SFI1A8K8P3 1242 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 NRG2O14511 850 aaPredicted RBP12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 ABLIM1O14639 778 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 C1RP00736 705 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 NPTX2P47972 431 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 PEX3P56589 373 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 UPP1Q16831 310 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 SPECC1Q5M775 1068 aa12.71□□□□□ -0.37
PRPF40B-212ENST00000551111 PPM1LQ5SGD2 360 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms