RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 IMPACTQ9P2X3 320 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 GINS2Q9Y248 185 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.81□□□□□ -1
DEPDC4-207ENST00000549249 TRPV2Q9Y5S1 764 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 CDY2AQ9Y6F7 541 aa8.81□□□□□ -1
DEPDC4-207ENST00000549249 BRCA2P51587 3418 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 SCN5AQ14524 2016 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 A0A0U1RQG5 324 aaPredicted RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 LRRIQ3A6PVS8 624 aaPredicted RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 RNF225M0QZC1 329 aaPredicted RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 KIAA0391O15091 583 aaKnown RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 EPHB6O15197 1021 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 OGTO15294 1046 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 MEFVO15553 781 aaPredicted RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 B4GALT4O60513 344 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CHRNA1P02708 482 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 AFPP02771 609 aaKnown RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 GYPCP04921 128 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 TPM2P07951 284 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 HOXA11P31270 313 aaPredicted RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 ACOT2P49753 483 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CDK7P50613 346 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CRYBB1P53674 252 aaPredicted RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 CDC42EP1Q00587 391 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 PPP3CAQ08209 521 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 NOLC1Q14978 699 aaKnown RBP eCLIP8.8□□□□□ -1
DEPDC4-207ENST00000549249 ZNF568Q3ZCX4 644 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CBWD6Q4V339 395 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CBWD3Q5JTY5 395 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CBWD5Q5RIA9 395 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 FKBP15Q5T1M5 1219 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 TCERG1LQ5VWI1 586 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 INTS8Q75QN2 995 aaKnown RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 CCDC186Q7Z3E2 898 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 ZBTB33Q86T24 672 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 FAM228AQ86W67 206 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 TMEM192Q8IY95 271 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CEP120Q8N960 986 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 PARD3BQ8TEW8 1205 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 VTI1AQ96AJ9 217 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 FAM84AQ96KN4 292 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 MSTO1Q9BUK6 570 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 CELF4Q9BZC1 486 aaKnown RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 TTYH3Q9C0H2 523 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 TOPORSQ9NS56 1045 aaPredicted RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 PCDHB3Q9Y5E6 796 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 KIAA0100Q14667 2235 aaKnown RBP8.8□□□□□ -1
DEPDC4-207ENST00000549249 PTPRJQ12913 1337 aa8.8□□□□□ -1
DEPDC4-207ENST00000549249 A0A1B0GUA9 196 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 ZNF233A6NK53 670 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 ARVCFO00192 962 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 CLDN3O15551 220 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 ZMYND10O75800 440 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 ERLIN2O94905 339 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 LDHAP00338 332 aaKnown RBP8.79□□□□□ -1
DEPDC4-207ENST00000549249 PTMAP06454 111 aaKnown RBP8.79□□□□□ -1
DEPDC4-207ENST00000549249 CTSHP09668 335 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 KRT13P13646 458 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 CAPN2P17655 700 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 EIF4BP23588 611 aaKnown RBP8.79□□□□□ -1
DEPDC4-207ENST00000549249 MATR3P43243 847 aaKnown RBP eCLIP8.79□□□□□ -1
DEPDC4-207ENST00000549249 FMO5P49326 533 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 FXR1P51114 621 aaKnown RBP eCLIP8.79□□□□□ -1
DEPDC4-207ENST00000549249 APBA1Q02410 837 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 PPP2R3AQ06190 1150 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 RBL2Q08999 1139 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 PTK7Q13308 1070 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 PSMD6Q15008 389 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 FAM26DQ5JW98 314 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 CATSPER4Q7RTX7 472 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 BRSK2Q8IWQ3 736 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 TC2NQ8N9U0 490 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 TET1Q8NFU7 2136 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 U2AF1L4Q8WU68 220 aaKnown RBP8.79□□□□□ -1
DEPDC4-207ENST00000549249 ZNF516Q92618 1163 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 CRACR2AQ9BSW2 395 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 TRPV6Q9H1D0 765 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 GANQ9H2C0 597 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 MMRN2Q9H8L6 949 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 KIAA1586Q9HCI6 787 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 PDE11AQ9HCR9 933 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 AGPAT5Q9NUQ2 364 aa8.79□□□□□ -1
DEPDC4-207ENST00000549249 CPSF3Q9UKF6 684 aaKnown RBP8.79□□□□□ -1
DEPDC4-207ENST00000549249 NOC2LQ9Y3T9 749 aaKnown RBP8.79□□□□□ -1
DEPDC4-207ENST00000549249 ALPK3Q96L96 1907 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 TTC26A0AVF1 554 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 GTPBP10A4D1E9 387 aaKnown RBP8.78□□□□□ -1
DEPDC4-207ENST00000549249 GOLGA6L6A8MZA4 724 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 MFAP3LO75121 409 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 LRRN2O75325 713 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 NOL4O94818 638 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 SGPL1O95470 568 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 NPTXRO95502 500 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 CD4P01730 458 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 MCF2P10911 925 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 ACTN1P12814 892 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 SLC9A1P19634 815 aa8.78□□□□□ -1
DEPDC4-207ENST00000549249 SFPQP23246 707 aaKnown RBP eCLIP8.78□□□□□ -1
DEPDC4-207ENST00000549249 GCLMP48507 274 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms