RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 TMEM161BQ8NDZ6 487 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 C7orf43Q8WVR3 580 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 TBC1D22BQ9NU19 505 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 NXF1Q9UBU9 619 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 RASGRF2O14827 1237 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 IGBP1P78318 339 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 BRDTQ58F21 947 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 ZNF365Q70YC5 407 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 SYNGAP1Q96PV0 1343 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 PLSCR1O15162 318 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 MEFVO15553 781 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 E2F5Q15329 346 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 SLFN11Q7Z7L1 901 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 SLC13A5Q86YT5 568 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 THNSL1Q8IYQ7 743 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 MRIQ9BWK5 157 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 POC1B-GALNT4F8VUJ3 575 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 K7ERI5 159 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 PHF2O75151 1096 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 RPS6KA5O75582 802 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 CTNNA2P26232 953 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 WNT7BP56706 349 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 HOOK3Q86VS8 718 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 TRIM50Q86XT4 487 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 LRRC71Q8N4P6 559 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 KIAA0391O15091 583 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 RALAP11233 206 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 PTGER2P43116 358 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 GMPSP49915 693 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 TFAMQ00059 246 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 KIF22Q14807 665 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 GKAP1Q5VSY0 366 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 ANGEL2Q5VTE6 544 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 DCUN1D2Q6PH85 259 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 NCAPG2Q86XI2 1143 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 ZNF526Q8TF50 670 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 MTFR1LQ9H019 292 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 JPH1Q9HDC5 661 aaPredicted RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 ADAM22Q9P0K1 906 aa14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 DDX20Q9UHI6 824 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-209ENST00000548825 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 GJB1P08034 283 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 WEE2P0C1S8 567 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 COILP38432 576 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 SPRED3Q2MJR0 410 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 SMTNL2Q2TAL5 461 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 FOXR2Q6PJQ5 311 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 PPP1R13LQ8WUF5 828 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 MSTO1Q9BUK6 570 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 SLC38A10Q9HBR0 1119 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 FBXO40Q9UH90 709 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 CNOT7Q9UIV1 285 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 R3HDM2Q9Y2K5 976 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 UMODL1Q5DID0 1318 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 PASKQ96RG2 1323 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 A0A0A6YYK5 440 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 VWA5AO00534 786 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 HLA-DRAP01903 254 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 ZSCAN5DPP0CG00 497 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 TNFRSF8P28908 595 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 CHKAP35790 457 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 ACTR2P61160 394 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 SKOR1P84550 965 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 PCNX4Q63HM2 1172 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 FAM47EQ6ZV65 393 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 SRRM1Q8IYB3 904 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 ATP6V0A1Q93050 837 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 TBC1D31Q96DN5 1066 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 SAE1Q9UBE0 346 aaPredicted RBP14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 ZNF148Q9UQR1 794 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 TAF1LQ8IZX4 1826 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 ARFGEF1Q9Y6D6 1849 aa14.6□□□□□ -0.07
PRPF40B-209ENST00000548825 FAM107AO95990 144 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 SEC16BQ96JE7 1060 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 RBAKQ9NYW8 714 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 ATRNL1Q5VV63 1379 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 CCND2P30279 289 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 HOXA7P31268 230 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 HSD17B4P51659 736 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 TTLL12Q14166 644 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 SMAD1Q15797 465 aaKnown RBP14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 CYP4A22Q5TCH4 519 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 DUPD1Q68J44 220 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 GPD1LQ8N335 351 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 RASGEF1CQ8N431 466 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 JPH2Q9BR39 696 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 PABPC3Q9H361 631 aaKnown RBP14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 RNF19AQ9NV58 838 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 HAUS2Q9NVX0 235 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 SLC9A2Q9UBY0 812 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 AGO2Q9UKV8 859 aaKnown RBP14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 INTUQ9ULD6 942 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 UBIAD1Q9Y5Z9 338 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 H0YGN5 161 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 KRT76Q01546 638 aa14.59□□□□□ -0.07
PRPF40B-209ENST00000548825 CDR2Q01850 454 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms