RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 COQ4Q9Y3A0 265 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 UBIAD1Q9Y5Z9 338 aa5.59□□□□□ -1.51
ATPAF1-212ENST00000542495 VGLL3A8MV65 326 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 TISP43B9A030 160 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 H0YIN7 160 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 K7ENM7 598 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 PODXLO00592 558 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CAND2O75155 1236 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 LRRN2O75325 713 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 SHBGP04278 402 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 ICAM1P05362 532 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 DRD4P21917 467 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 COMTP21964 271 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 COPB2P35606 906 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 MMP13P45452 471 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 RPL21P46778 160 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 GCLMP48507 274 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 MARCKSL1P49006 195 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 PMS2P54278 862 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 NCKAP1LP55160 1127 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 MAGOHP61326 146 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 MAP3K10Q02779 954 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 ENPEPQ07075 957 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CETN1Q12798 172 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 PRPF4BQ13523 1007 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 SIX1Q15475 284 aaPredicted RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 AOC3Q16853 763 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 KRT71Q3SY84 523 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 LACTB2Q53H82 288 aaPredicted RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 FKBP1CQ5VVH2 108 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 FBXW10Q5XX13 1052 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 TTC27Q6P3X3 843 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 MIER3Q7Z3K6 550 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CROCCP2Q86T23 111 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 NOP9Q86U38 636 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 HOOK3Q86VS8 718 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 DEPDC4Q8N2C3 294 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 UBL4BQ8N7F7 174 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 C12orf50Q8NA57 414 aaPredicted RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 XXYLT1Q8NBI6 393 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 FBXO25Q8TCJ0 367 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CLEC4DQ8WXI8 215 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 SHC3Q92529 594 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 SLCO2A1Q92959 643 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 MAGOHBQ96A72 148 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 C18orf8Q96DM3 657 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 KREMEN1Q96MU8 473 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 RUNDC3BQ96NL0 473 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CEP89Q96ST8 783 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CBWD1Q9BRT8 395 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 TMEM117Q9H0C3 514 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 ADAM7Q9H2U9 754 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CENPHQ9H3R5 247 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC134Q9H6E4 229 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 AGO4Q9HCK5 861 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 PPANQ9NQ55 473 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 KCNH7Q9NS40 1196 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 HSPBP1Q9NZL4 362 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 TMOD4Q9NZQ9 345 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 COL20A1Q9P218 1284 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 PARP2Q9UGN5 583 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 PGAP2Q9UHJ9 254 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 FKBPLQ9UIM3 349 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 RASAL2Q9UJF2 1139 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 ATP8A1Q9Y2Q0 1164 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 SNX24Q9Y343 169 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CAPN7Q9Y6W3 813 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 ZHX2Q9Y6X8 837 aa5.58□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC169A6NNP5 214 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 RASSF9O75901 435 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SGPL1O95470 568 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 F12P00748 615 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ADRB2P07550 413 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PYGMP11217 842 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CAP2P40123 477 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 QARSP47897 775 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 MXI1P50539 228 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 GPC3P51654 580 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SMTNP53814 917 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 FMO1Q01740 532 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 IFT88Q13099 833 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SPP2Q13103 211 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PTK7Q13308 1070 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 RASA3Q14644 834 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 KCTD19Q17RG1 926 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TKFCQ3LXA3 575 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PUS10Q3MIT2 529 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 PCNX4Q63HM2 1172 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 AADACL2Q6P093 401 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 CYFIP1Q7L576 1253 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 HAUS6Q7Z4H7 955 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 TAX1BP1Q86VP1 789 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC13A5Q86YT5 568 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 C4orf19Q8IY42 314 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SAMD3Q8N6K7 520 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC17A8Q8NDX2 589 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 ZSWIM2Q8NEG5 633 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 SUPT20HQ8NEM7 779 aa5.57□□□□□ -1.52
ATPAF1-212ENST00000542495 IL31RAQ8NI17 732 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms