RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 IL18RAPO95256 599 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 RPN1P04843 607 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 LINC00271P0C7V0 271 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 CXCL8P10145 99 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 GARTP22102 1010 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 UBE2HP62256 183 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 SNRPFP62306 86 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 POU5F1Q01860 360 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 DSC1Q08554 894 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 ELAVL2Q12926 359 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 GLRA4Q5JXX5 417 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 PLPP4Q5VZY2 271 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 DDX53Q86TM3 631 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZNF280BQ86YH2 543 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 COLGALT2Q8IYK4 626 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 GRAMD1CQ8IYS0 662 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 FMR1NBQ8N0W7 255 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 VPS52Q8N1B4 723 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 CEP120Q8N960 986 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 BEST2Q8NFU1 509 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 SPPL3Q8TCT6 385 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 SMARCE1Q969G3 411 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 KIF12Q96FN5 646 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 IGSF21Q96ID5 467 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZBTB45Q96K62 511 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 FIZ1Q96SL8 496 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 CDCA3Q99618 268 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 EMILIN2Q9BXX0 1053 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 GOLPH3LQ9H4A5 285 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 TLE6Q9H808 572 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 KIAA1586Q9HCI6 787 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 MRPL17Q9NRX2 175 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 CNTN3Q9P232 1028 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 CGNQ9P2M7 1197 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 THEGQ9P2T0 379 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 DNAJB4Q9UDY4 337 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 COG5Q9UP83 839 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 R3HCC1Q9Y3T6 440 aaKnown RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 NUB1Q9Y5A7 615 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 COL4A4P53420 1690 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 GBF1Q92538 1859 aa5.88□□□□□ -1.47
HMGB1P40-201ENST00000525121 SMIM28A0A1B0GU29 152 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 ARHGEF37A1IGU5 675 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 ANKRD63C9JTQ0 380 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 ABLIM1O14639 778 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 PTGESO14684 152 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 EXTL3O43909 919 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 B3GAT3O94766 335 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 DDHD2O94830 711 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 CLSTN1O94985 981 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 CXCL14O95715 111 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 KCNE1P15382 129 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 CASP1P29466 404 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 RPL9P32969 192 aaKnown RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 NRIP1P48552 1158 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 GLUD2P49448 558 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 ACOT2P49753 483 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 NDUFV1P49821 464 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 AFF1P51825 1210 aaKnown RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 CASP5P51878 434 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 STIM1Q13586 685 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 TMEM132DQ14C87 1099 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 SURF1Q15526 300 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 KNOP1Q1ED39 458 aaKnown RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 USP41Q3LFD5 358 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 KMT5BQ4FZB7 885 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 SEZ6Q53EL9 994 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 TCEAL5Q5H9L2 206 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 FUT10Q6P4F1 479 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 PDXDC1Q6P996 788 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 DCLRE1AQ6PJP8 1040 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 USP37Q86T82 979 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 NELFCDQ8IXH7 590 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 GPD1LQ8N335 351 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 CACTINQ8WUQ7 758 aaKnown RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 HLA-CQ95604 372 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 TIGD1Q96MW7 591 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 PPP1R10Q96QC0 940 aaKnown RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 FAM213AQ9BRX8 229 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 HERC2P3Q9BVR0 1158 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 ASB7Q9H672 318 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 SLC39A2Q9NP94 309 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 TSHZ2Q9NRE2 1034 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 RBAKQ9NYW8 714 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 DPP7Q9UHL4 492 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 ADAM28Q9UKQ2 775 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 UBQLN1Q9UMX0 589 aaKnown RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 FAM50BQ9Y247 325 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 DERAQ9Y315 318 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 STYXL1Q9Y6J8 313 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 RALGAPA2Q2PPJ7 1873 aa5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 RANBP2P49792 3224 aaKnown RBP5.87□□□□□ -1.47
HMGB1P40-201ENST00000525121 TTC26A0AVF1 554 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 ZNF233A6NK53 670 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 LACTBL1A8MY62 500 aa5.86□□□□□ -1.47
HMGB1P40-201ENST00000525121 TISP43B9A030 160 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms