RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SRGAP2CP0DJJ0 459 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 PSMC3P17980 439 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 NUCB1Q02818 461 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 ZNF252P-AS1Q0IIN9 211 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 LRCH2Q5VUJ6 765 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 RNF43Q68DV7 783 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 NOTUMQ6P988 496 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 SYNE3Q6ZMZ3 975 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 MIER3Q7Z3K6 550 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 CACNA2D4Q7Z3S7 1137 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 CEP57Q86XR8 500 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 HACE1Q8IYU2 909 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 REXO1Q8N1G1 1221 aaKnown RBP19.5■□□□□ 0.71
PVT1-220ENST00000524165 PRPF31Q8WWY3 499 aaKnown RBP19.5■□□□□ 0.71
PVT1-220ENST00000524165 ZCCHC14Q8WYQ9 949 aaKnown RBP19.5■□□□□ 0.71
PVT1-220ENST00000524165 RABGGTAQ92696 567 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 MSANTD3Q96H12 275 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 ZMYND12Q9H0C1 365 aa19.5■□□□□ 0.71
PVT1-220ENST00000524165 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 CEBPBP17676 345 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 CCNE1P24864 410 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 GDI1P31150 447 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 FAM78AQ5JUQ0 283 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 FAM171A1Q5VUB5 890 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 ANO5Q75V66 913 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 EXOC8Q8IYI6 725 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 PSPC1Q8WXF1 523 aaKnown RBP19.49■□□□□ 0.71
PVT1-220ENST00000524165 SLC7A3Q8WY07 619 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 CSRNP2Q9H175 543 aa19.49■□□□□ 0.71
PVT1-220ENST00000524165 TSPAN1O60635 241 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 MICAL2O94851 1124 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 PTPN2P17706 415 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 SPINK2P20155 84 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 LAMTOR4Q0VGL1 99 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 ELAVL2Q12926 359 aaKnown RBP19.48■□□□□ 0.71
PVT1-220ENST00000524165 DEPDC1BQ8WUY9 529 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 GAB3Q8WWW8 586 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 ASB16Q96NS5 453 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 APOL6Q9BWW8 343 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 C6orf50Q9HD87 102 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 VPS45Q9NRW7 570 aa19.48■□□□□ 0.71
PVT1-220ENST00000524165 ADAMTS20P59510 1910 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 EML5Q05BV3 1969 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 GIPC1O14908 333 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 ADAMTS3O15072 1205 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 PSMD10O75832 226 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 OR1D2P34982 312 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 NCBP1Q09161 790 aaKnown RBP19.47■□□□□ 0.71
PVT1-220ENST00000524165 PRSS36Q5K4E3 855 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 DGKKQ5KSL6 1271 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 APOA5Q6Q788 366 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 VITQ6UXI7 678 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 PAAF1Q9BRP4 392 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 SCNM1Q9BWG6 230 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 TRIM6Q9C030 488 aaPredicted RBP19.47■□□□□ 0.71
PVT1-220ENST00000524165 NXF3Q9H4D5 531 aaKnown RBP19.47■□□□□ 0.71
PVT1-220ENST00000524165 PPME1Q9Y570 386 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 RBM8AQ9Y5S9 174 aaKnown RBP19.47■□□□□ 0.71
PVT1-220ENST00000524165 IGSF10Q6WRI0 2623 aa19.47■□□□□ 0.71
PVT1-220ENST00000524165 HELZ2Q9BYK8 2649 aaKnown RBP19.47■□□□□ 0.71
PVT1-220ENST00000524165 CCDC163A0A0D9SF12 145 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 ASAP2O43150 1006 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 RPP40O75818 363 aaKnown RBP19.46■□□□□ 0.71
PVT1-220ENST00000524165 CHMLP26374 656 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 MPLP40238 635 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 SPIRE1Q08AE8 756 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 TUSC3Q13454 348 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 RTN1Q16799 776 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 PFKFB3Q16875 520 aaPredicted RBP19.46■□□□□ 0.71
PVT1-220ENST00000524165 PLA2G4FQ68DD2 849 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 B3GNT9Q6UX72 402 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 Q6ZS52 159 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 RNF149Q8NC42 400 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 HASPINQ8TF76 798 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 KIF12Q96FN5 646 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 CCDC136Q96JN2 1154 aa19.46■□□□□ 0.71
PVT1-220ENST00000524165 DHX33Q9H6R0 707 aaKnown RBP19.46■□□□□ 0.71
PVT1-220ENST00000524165 RBM12Q9NTZ6 932 aaKnown RBP19.46■□□□□ 0.71
PVT1-220ENST00000524165 SMG1Q96Q15 3661 aaKnown RBP19.46■□□□□ 0.71
PVT1-220ENST00000524165 ARNTLO00327 626 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 ZNF197O14709 1029 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 ZNF263O14978 683 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 KIF4AO95239 1232 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 AKAP5P24588 427 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 PSMC5P62195 406 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 KBTBD6Q86V97 674 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 CCDC12Q8WUD4 166 aaPredicted RBP19.45■□□□□ 0.7
PVT1-220ENST00000524165 SMARCD2Q92925 531 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 TMEM143Q96AN5 459 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 CPB2Q96IY4 423 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 ZC3H10Q96K80 434 aaKnown RBP19.45■□□□□ 0.7
PVT1-220ENST00000524165 LRRC2Q9BYS8 371 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 SMOC1Q9H4F8 434 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 C8orf33Q9H7E9 229 aaPredicted RBP19.45■□□□□ 0.7
PVT1-220ENST00000524165 C2orf42Q9NWW7 574 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 MTRRQ9UBK8 725 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 CACNG4Q9UBN1 327 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 LOC400499M0QZD8 3231 aa19.45■□□□□ 0.7
PVT1-220ENST00000524165 ARHGEF37A1IGU5 675 aa19.44■□□□□ 0.7
PVT1-220ENST00000524165 NRG2O14511 850 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms