RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 BARHL2Q9NY43 387 aa15.51■□□□□ 0.07
NKX3-1-202ENST00000523261 C4orf47A7E2U8 309 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 hCG_1984214I3L0E3 225 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 ADAMTS3O15072 1205 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 RPP40O75818 363 aaKnown RBP15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 PSMC3P17980 439 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 CIITAP33076 1130 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 LIFRP42702 1097 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 MLLT6P55198 1093 aaPredicted RBP15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 FUT2Q10981 343 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 HSP90AA2PQ14568 343 aaPredicted RBP15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 PRSS36Q5K4E3 855 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 RTL10Q7L3V2 364 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 ZNF713Q8N859 430 aaPredicted RBP15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 TMEM87BQ96K49 555 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 ASB16Q96NS5 453 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 PAAF1Q9BRP4 392 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 EDEM2Q9BV94 578 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 GIT1Q9Y2X7 761 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 SLC12A7Q9Y666 1083 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 FREM2Q5SZK8 3169 aa15.5■□□□□ 0.07
NKX3-1-202ENST00000523261 VWA8A3KMH1 1905 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 ARNTLO00327 626 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 MSH4O15457 936 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 GAS7O60861 476 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 SRGAP2CP0DJJ0 459 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 CEACAM1P13688 526 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 OR1D2P34982 312 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 GRIK3Q13003 919 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 MICU3Q86XE3 530 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 HASPINQ8TF76 798 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 PRPF31Q8WWY3 499 aaKnown RBP15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 TCEAL4Q96EI5 215 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 RIT2Q99578 217 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 APOL6Q9BWW8 343 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 NXF3Q9H4D5 531 aaKnown RBP15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 NEUROG3Q9Y4Z2 214 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 V9GY48 417 aaPredicted RBP15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 NAV2Q8IVL1 2488 aa15.49■□□□□ 0.07
NKX3-1-202ENST00000523261 BPTFQ12830 3046 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 DDX11L8A8MPP1 907 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 CSRP1P21291 193 aaKnown RBP15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 DAB2IPQ5VWQ8 1189 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 ANO5Q75V66 913 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 RDM1Q8NG50 284 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 SLC5A5Q92911 643 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 CCDC51Q96ER9 411 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 MSANTD3Q96H12 275 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 ZC3H10Q96K80 434 aaKnown RBP15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 CSRNP2Q9H175 543 aa15.48■□□□□ 0.07
NKX3-1-202ENST00000523261 NCANO14594 1321 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 WDR27A2RRH5 827 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 ZNF263O14978 683 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 TSPAN1O60635 241 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 ERLIN2O94905 339 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 KIF4AO95239 1232 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 PTPN2P17706 415 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 MCM5P33992 734 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 PXNP49023 591 aaPredicted RBP15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 DGKKQ5KSL6 1271 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 NOTUMQ6P988 496 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 PDXDC1Q6P996 788 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 MIER3Q7Z3K6 550 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 PDZD3Q86UT5 571 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 EXOC6Q8TAG9 804 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 DEPDC1BQ8WUY9 529 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 SMARCD2Q92925 531 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 GJA10Q969M2 543 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 CPB2Q96IY4 423 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 ZSWIM3Q96MP5 696 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 MSRB2Q9Y3D2 182 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 GPSM3Q9Y4H4 160 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 EML5Q05BV3 1969 aa15.47■□□□□ 0.07
NKX3-1-202ENST00000523261 CCDC163A0A0D9SF12 145 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 HYAL3O43820 417 aaPredicted RBP15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 EDIL3O43854 480 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 EXTL3O43909 919 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 AKAP3O75969 853 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 CCDC192P0DO97 292 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 AKAP5P24588 427 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 AXLP30530 894 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 VIPR2P41587 438 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 CCR2P41597 374 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 SOX9P48436 509 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 LAMTOR4Q0VGL1 99 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 LRCH2Q5VUJ6 765 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 PLA2G4FQ68DD2 849 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 B4GALNT3Q6L9W6 998 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 KIAA1211LQ6NV74 962 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 C1orf228Q6PIY5 440 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 TXNDC11Q6PKC3 985 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 MFSD6LQ8IWD5 586 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 PSPC1Q8WXF1 523 aaKnown RBP15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 TMEM143Q96AN5 459 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 TEKT3Q9BXF9 490 aa15.46■□□□□ 0.07
NKX3-1-202ENST00000523261 KLK14Q9P0G3 267 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms