RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EXOSC6Q5RKV6 272 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 BORAQ6PGQ7 559 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 FBXO38Q6PIJ6 1188 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CHSY3Q70JA7 882 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 BEND5Q7L4P6 421 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 TTC30AQ86WT1 665 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 TMEM151AQ8N4L1 468 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 NGEFQ8N5V2 710 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 GALNT11Q8NCW6 608 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 TTLL11Q8NHH1 800 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 AFG1LQ8WV93 481 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 ZNF622Q969S3 477 aaKnown RBP eCLIP4.51□□□□□ -1.692e-20■□□□□ 9.4
SKP1-209ENST00000522552 ASIC4Q96FT7 647 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CNDP2Q96KP4 475 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 GDF15Q99988 308 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 SLC12A9Q9BXP2 914 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CD244Q9BZW8 370 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 MLXIPQ9HAP2 919 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 SPON1Q9HCB6 807 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 KCNH7Q9NS40 1196 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PDRG1Q9NUG6 133 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CNPY2Q9Y2B0 182 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PCDHA13Q9Y5I0 950 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 TDRD9Q8NDG6 1382 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 hCG_1807616A0A1W2PRN6 198 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 HMX3A6NHT5 357 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 DLL1O00548 723 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PIP5K1BO14986 540 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 NDST3O95803 873 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 MYL4P12829 197 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CST5P28325 142 aaPredicted RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 HPDP32754 393 aaPredicted RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 BCL6P41182 706 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 FNTBP49356 437 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CCR9P51686 369 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PRKAA2P54646 552 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 RPS16P62249 146 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 CALD1Q05682 793 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 NMIQ13287 307 aaPredicted RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 CUL4BQ13620 913 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 SLC12A1Q13621 1099 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 ADRM1Q16186 407 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 FIGNQ5HY92 759 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CATSPEREQ5SY80 951 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 ZNF362Q5T0B9 420 aaPredicted RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 MIGA2Q7L4E1 593 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 TMC6Q7Z403 805 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 SDCCAG8Q86SQ7 713 aaPredicted RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 TTC7BQ86TV6 843 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 NLRP10Q86W26 655 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PHYKPLQ8IUZ5 450 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CELF5Q8N6W0 485 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 DTWD2Q8NBA8 298 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CEP70Q8NHQ1 597 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 THAP4Q8WY91 577 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 BTBD6Q96KE9 485 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 COG8Q96MW5 612 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 MDFIQ99750 246 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 WNT8AQ9H1J5 351 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PRDM13Q9H4Q3 707 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 RC3H2Q9HBD1 1191 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 SSU72Q9NP77 194 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 PRDM5Q9NQX1 630 aaPredicted RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 LMBRD1Q9NUN5 540 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 WDR35Q9P2L0 1181 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 AFF4Q9UHB7 1163 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 CPA4Q9UI42 421 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 RPS6KA6Q9UK32 745 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PCDHGB4Q9UN71 923 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 TIMM13Q9Y5L4 95 aaPredicted RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 ELOA3CA0A087WX78 387 aaPredicted RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 ELOA3DA6NLF2 546 aaPredicted RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 ADARB2-AS1A8MUL3 147 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 AP3D1O14617 1153 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SPTLC2O15270 562 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 ASNA1O43681 348 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 CLASP2O75122 1294 aaKnown RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 GJB3O75712 270 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 MLYCDO95822 493 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 EN2P19622 333 aaPredicted RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 PDE6CP51160 858 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 PNLIPRP1P54315 467 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SPIRE1Q08AE8 756 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 ADAM9Q13443 819 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SPIDRQ14159 915 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 WTAPQ15007 396 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 NR0B2Q15466 257 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 UVSSAQ2YD98 709 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 ELOA3BQ3SY89 546 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 ARHGAP15Q53QZ3 475 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 SNX30Q5VWJ9 437 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 KAZNQ674X7 775 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 ISM2Q6H9L7 571 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 TIGD7Q6NT04 549 aaPredicted RBP4.5□□□□□ -1.69
SKP1-209ENST00000522552 CATSPERGQ6ZRH7 1159 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 EP400NLQ6ZTU2 488 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 C8orf86Q6ZUL3 223 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 TMTC3Q6ZXV5 915 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 HEATR3Q7Z4Q2 680 aa4.5□□□□□ -1.69
SKP1-209ENST00000522552 NME9Q86XW9 330 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms