RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CTXN3Q4LDR2 81 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 KHDC1Q4VXA5 237 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 ARHGAP15Q53QZ3 475 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 MUM1L1Q5H9M0 696 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 KHDC1LQ5JSQ8 128 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 LRCH2Q5VUJ6 765 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 TRIM68Q6AZZ1 485 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CEP68Q76N32 757 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 RNF44Q7L0R7 432 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 MCM10Q7L590 875 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CPLX4Q7Z7G2 160 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 NME9Q86XW9 330 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 EPHX4Q8IUS5 362 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CEP97Q8IW35 865 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 SMYD4Q8IYR2 804 aaPredicted RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CELF5Q8N6W0 485 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 NAT8LQ8N9F0 302 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 GALNT11Q8NCW6 608 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 TTLL11Q8NHH1 800 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CSGALNACT1Q8TDX6 532 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 LRRC46Q96FV0 321 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CALML4Q96GE6 196 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CLPTM1LQ96KA5 538 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 SNX22Q96L94 193 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 TUBGCP5Q96RT8 1024 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 PRPF18Q99633 342 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 EIF2AQ9BY44 585 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CD244Q9BZW8 370 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 OR10A4Q9H209 315 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 PDCL3Q9H2J4 239 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 JPH1Q9HDC5 661 aaPredicted RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 SARS2Q9NP81 518 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 TBC1D23Q9NUY8 699 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 TBK1Q9UHD2 729 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 TMPRSS11EQ9UL52 423 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZNF215Q9UL58 517 aaPredicted RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 KNSTRNQ9Y448 316 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCDHA1Q9Y5I3 950 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 NUMBLQ9Y6R0 609 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 TRBV23OR9-2A0A075B6M9 112 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ST20-MTHFSA0A0A6YYL1 179 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 MPHOSPH10O00566 681 aaKnown RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ASNA1O43681 348 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 GDF9O60383 454 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 GJB3O75712 270 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 BEST1O76090 585 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 MT-ND3P03897 115 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ANXA2P07355 339 aaKnown RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ITGA2BP08514 1039 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ITGA5P08648 1049 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 BMP4P12644 408 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 BMP1P13497 986 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 TYRP14679 529 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 FOSL1P15407 271 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 CST5P28325 142 aaPredicted RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADSLP30566 484 aaPredicted RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 MCAMP43121 646 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 SEC24CP53992 1094 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRKAA2P54646 552 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 CREB5Q02930 508 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 CHAF1BQ13112 559 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 PRPF4BQ13523 1007 aaKnown RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 EIF4A2Q14240 407 aaKnown RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 NOMO1Q15155 1222 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ADRM1Q16186 407 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMEM266Q2M3C6 531 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 MMEL1Q495T6 779 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 CATSPEREQ5SY80 951 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF362Q5T0B9 420 aaPredicted RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 UBXN11Q5T124 520 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 SNX30Q5VWJ9 437 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 KAZNQ674X7 775 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 NAA16Q6N069 864 aaPredicted RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ZNF783Q6ZMS7 281 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 CATSPERGQ6ZRH7 1159 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 TMTC3Q6ZXV5 915 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 WFDC8Q8IUA0 241 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 LYSMD2Q8IV50 215 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 RHOT1Q8IXI2 618 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 NLGN4XQ8N0W4 816 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 OR8H3Q8N146 312 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 GLIS1Q8NBF1 620 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 CCDC150Q8NCX0 1101 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 LILRB1Q8NHL6 650 aaPredicted RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 CYP2W1Q8TAV3 490 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 WHAMMQ8TF30 809 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 RUFY2Q8WXA3 655 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 RAB24Q969Q5 203 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 EID2BQ96D98 161 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 EYA3Q99504 573 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 VRK1Q99986 396 aaPredicted RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 WNT8AQ9H1J5 351 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 ACAD9Q9H845 621 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 SPON1Q9HCB6 807 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 SEPT11Q9NVA2 429 aaKnown RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 PIH1D1Q9NWS0 290 aaKnown RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 KCNK4Q9NYG8 393 aa4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 XPO7Q9UIA9 1087 aaKnown RBP4.4□□□□□ -1.71
RNU4-60P-201ENST00000517239 HERC5Q9UII4 1024 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms