RNA–Protein interactions for RNA: ENST00000517049.1

RNU6-1271P-201, Transcript of RNA, U6 small nuclear 1271, pseudogene, humanhuman

BASIC

Gene RNU6-1271P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1271P-201ENST00000517049 DDX53Q86TM3 631 aaKnown RBP3.25□□□□□ -1.89
RNU6-1271P-201ENST00000517049 FERMT2Q96AC1 680 aa3.25□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ZNF428Q96B54 188 aa3.25□□□□□ -1.89
RNU6-1271P-201ENST00000517049 FUBP3Q96I24 572 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU6-1271P-201ENST00000517049 PPP1R10Q96QC0 940 aaKnown RBP3.25□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ELF4Q99607 663 aaPredicted RBP3.25□□□□□ -1.89
RNU6-1271P-201ENST00000517049 CCDC187A0A096LP49 1063 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ITGA10O75578 1167 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GLRX3O76003 335 aaKnown RBP3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GASTP01350 101 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 SLC9A1P19634 815 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 FGFR4P22455 802 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 XPAP23025 273 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 FLT3LGP49771 235 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 NRG3P56975 720 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 CLRN1P58418 232 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 TFF2Q03403 129 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 MGAT5Q09328 741 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 KRTAP27-1Q3LI81 207 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 TSTD2Q5T7W7 516 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 LMBR1LQ6UX01 489 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 NEK8Q86SG6 692 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ZZZ3Q8IYH5 903 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 MDM1Q8TC05 714 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 DENND1AQ8TEH3 1009 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GAB3Q8WWW8 586 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 RTF1Q92541 710 aaKnown RBP3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 PHACTR3Q96KR7 559 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 MRPL4Q9BYD3 311 aaKnown RBP3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 REXO4Q9GZR2 422 aaKnown RBP3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 CCDC113Q9H0I3 377 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 VPS33BQ9H267 617 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 TRIM39Q9HCM9 518 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 NRIP3Q9NQ35 241 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ANLNQ9NQW6 1124 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 SPO11Q9Y5K1 396 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 NOTCH4Q99466 2003 aa3.24□□□□□ -1.89
RNU6-1271P-201ENST00000517049 PPEF2O14830 753 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ERN1O75460 977 aaKnown RBP3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GRIA3P42263 894 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 MAPK10P53779 464 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 MEF2AQ02078 507 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 RASA3Q14644 834 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ZCCHC8Q6NZY4 707 aaKnown RBP3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ZNF782Q6ZMW2 699 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 MED25Q71SY5 747 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 PEG10Q86TG7 708 aaKnown RBP3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 COLGALT2Q8IYK4 626 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 SLC35B2Q8TB61 432 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 SSH3Q8TE77 659 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 TINF2Q9BSI4 451 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 TRIM55Q9BYV6 548 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GPRC5DQ9NZD1 345 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 SAMD15Q9P1V8 674 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 KIAA1522Q9P206 1035 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ADAM21Q9UKJ8 722 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 USP18Q9UMW8 372 aa3.23□□□□□ -1.89
RNU6-1271P-201ENST00000517049 CCDC78A2IDD5 438 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 MPPED1O15442 326 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GPANK1O95872 356 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ELFN1P0C7U0 828 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GCSHP23434 173 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ERCC5P28715 1186 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 FAM47AQ5JRC9 791 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 PRAMEF14Q5SWL7 426 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 CREB3L3Q68CJ9 461 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 AMIGO2Q86SJ2 522 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GLB1L2Q8IW92 636 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ZBTB8BQ8NAP8 495 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 SNX33Q8WV41 574 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 GMLQ99445 158 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ZMAT4Q9H898 229 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 B4GALT6Q9UBX8 382 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 ZNF112Q9UJU3 913 aa3.22□□□□□ -1.89
RNU6-1271P-201ENST00000517049 PNPLA7Q6ZV29 1317 aa3.21□□□□□ -1.89
RNU6-1271P-201ENST00000517049 IGKV2D-30A0A075B6S6 120 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 ST20-MTHFSA0A0A6YYL1 179 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 CXorf49A8MYA2 514 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 SNRPA1P09661 255 aaKnown RBP3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 CRHR1P34998 444 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 NR4A2P43354 598 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 RANGAP1P46060 587 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 HSD11B2P80365 405 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 NBPF8Q3BBV2 869 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 ZBTB41Q5SVQ8 909 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 KAZNQ674X7 775 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 VWA1Q6PCB0 445 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 EBF3Q9H4W6 596 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 CABP5Q9NP86 173 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 ELOVL5Q9NYP7 299 aa3.21□□□□□ -1.9
RNU6-1271P-201ENST00000517049 KDM2BQ8NHM5 1336 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 YY2O15391 372 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 PROM1O43490 865 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 PRAMEF4O60810 478 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 TMEM127O75204 238 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 TOP3BO95985 862 aaKnown RBP3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 CD40P25942 277 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 CERS1P27544 350 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 EPHB2P29323 1055 aa3.2□□□□□ -1.9
RNU6-1271P-201ENST00000517049 ZNF134P52741 427 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms