RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF480Q8WV37 535 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 ITFG2Q969R8 447 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 IL17RAQ96F46 866 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 TMEM176AQ96HP8 235 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 TSPAN18Q96SJ8 248 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 PDCD2LQ9BRP1 358 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 MRIQ9BWK5 157 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 QRSL1Q9H0R6 528 aaKnown RBP5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 GREM2Q9H772 168 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 SMC4Q9NTJ3 1288 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 CHD1O14646 1710 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 RAPGEF6Q8TEU7 1601 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 GPATCH8Q9UKJ3 1502 aaKnown RBP5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 CD109Q6YHK3 1445 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 KIF16BQ96L93 1317 aa5.48□□□□□ -1.53
HMGB3P13-201ENST00000511263 TIAM1Q13009 1591 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 NCOA2Q15596 1464 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 SHTN1A0MZ66 631 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 TRIM75PA6NK02 468 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 FAM171A2A8MVW0 826 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 PPFIA4O75335 1185 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 ENDOD1O94919 500 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 CCND1P24385 295 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 ECHS1P30084 290 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 ACVRL1P37023 503 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 GDF5P43026 501 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 TNNT3P45378 269 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 SLC16A1P53985 500 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 PER3P56645 1201 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 GABPB1Q06547 395 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 KRTAP1-1Q07627 177 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 UBE3CQ15386 1083 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 ELAVL1Q15717 326 aaKnown RBP5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 CCDC96Q2M329 555 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 TOR2AQ5JU69 321 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 SYDE2Q5VT97 1194 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 SPTY2D1Q68D10 685 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 MAMDC4Q6UXC1 1216 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 SLC41A1Q8IVJ1 513 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 NGEFQ8N5V2 710 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 GPR156Q8NFN8 814 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 TGFBRAP1Q8WUH2 860 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 ZNF512Q96ME7 567 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 FDXACB1Q9BRP7 624 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 TLR9Q9NR96 1032 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 HOMER2Q9NSB8 354 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 RBM12Q9NTZ6 932 aaKnown RBP5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 ING3Q9NXR8 418 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 GPR45Q9Y5Y3 372 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 RTEL1-TNFRSF6BF6WH68 1400 aa5.47□□□□□ -1.53
HMGB3P13-201ENST00000511263 AKR1B10O60218 316 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 RPLP2P05387 115 aaKnown RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZNF853P0CG23 659 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 CTSSP25774 331 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 ACRV1P26436 265 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 MGAT1P26572 445 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 GPR3P46089 330 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 ERVK-21P61565 698 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 IGBP1P78318 339 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 KRT85P78386 507 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 AMPD3Q01432 767 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 PTH1RQ03431 593 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 MALLQ13021 153 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 ATP2B3Q16720 1220 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 DCAF17Q5H9S7 520 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 PGM2L1Q6PCE3 622 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 ANKRD23Q86SG2 305 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 PALM2Q8IXS6 379 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 ST8SIA2Q92186 375 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 MTMR8Q96EF0 704 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 CEP89Q96ST8 783 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 UHRF1Q96T88 793 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 ZNF747Q9BV97 191 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 FAM126AQ9BYI3 521 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 MYH16Q9H6N6 1097 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 SUDS3Q9H7L9 328 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 AGO3Q9H9G7 860 aaKnown RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 CCM2LQ9NUG4 571 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 FGD6Q6ZV73 1430 aa5.46□□□□□ -1.54
HMGB3P13-201ENST00000511263 WDR7Q9Y4E6 1490 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 ANKRD30AQ9BXX3 1397 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 EHBP1L1Q8N3D4 1523 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 ARAP3Q8WWN8 1544 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 LOC102724159A0A0B4J2E5 919 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 KLHL33A6NCF5 533 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 B5MCH6 92 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 TEX33O43247 280 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 HOXA3O43365 443 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 RECQL4O94761 1208 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 MSNP26038 577 aaKnown RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 TDO2P48775 406 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 MAN2A2P49641 1150 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 ADAM8P78325 824 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 APBA1Q02410 837 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 TRDNQ13061 729 aa5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 MRPL49Q13405 166 aaKnown RBP5.45□□□□□ -1.54
HMGB3P13-201ENST00000511263 MYBPC2Q14324 1141 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms