RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 MAN1C1Q9NR34 630 aa4.19□□□□□ -1.74
HMGB3P15-201ENST00000507326 C9orf78Q9NZ63 289 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P15-201ENST00000507326 PGAP2Q9UHJ9 254 aa4.19□□□□□ -1.74
HMGB3P15-201ENST00000507326 NOB1Q9ULX3 412 aaKnown RBP4.19□□□□□ -1.74
HMGB3P15-201ENST00000507326 MORC2Q9Y6X9 1032 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P15-201ENST00000507326 SYNRGQ9UMZ2 1314 aa4.19□□□□□ -1.74
HMGB3P15-201ENST00000507326 ZBTB48P10074 688 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 HSD3B1P14060 373 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 BMP5P22003 454 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 CLK1P49759 484 aaKnown RBP4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 PLIN5Q00G26 463 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 SLC6A3Q01959 620 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 COL10A1Q03692 680 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 WASHC5Q12768 1159 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 PRKG2Q13237 762 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 TMEM177Q53S58 311 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 MEX3CQ5U5Q3 659 aaKnown RBP4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 FAAH2Q6GMR7 532 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 ABHD17CQ6PCB6 329 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 BRAPQ7Z569 592 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 ANKRD13BQ86YJ7 626 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 PPM1KQ8N3J5 372 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 ARL6IP6Q8N6S5 226 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 NAXEQ8NCW5 288 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 PGBD4Q96DM1 585 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 HOOK2Q96ED9 719 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 TCF25Q9BQ70 676 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 PUS7LQ9H0K6 701 aaKnown RBP4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 KANSL2Q9H9L4 492 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 KIAA1586Q9HCI6 787 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 OBP2AQ9NY56 170 aa4.18□□□□□ -1.74
HMGB3P15-201ENST00000507326 TCRBV16S1A1N1A0A5B0 115 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 VSTM5A8MXK1 200 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 TRAF5O00463 557 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 CPLX1O14810 134 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 KATNA1O75449 491 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 RFPL3O75679 317 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 SNUPNO95149 360 aaKnown RBP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 RAPGEF3O95398 923 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 SETSIPP0DME0 302 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 ZSCAN20P17040 1043 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 TYRP1P17643 537 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 KCNA6P17658 529 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 CASQ1P31415 396 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 CTNNA1P35221 906 aaKnown RBP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 PTGS2P35354 604 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 NEK3P51956 506 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 ROM1Q03395 351 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 BTKQ06187 659 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 ADCY1Q08828 1119 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 DGKDQ16760 1214 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 LONRF1Q17RB8 773 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 COBLL1Q53SF7 1204 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 TRIM61Q5EBN2 209 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 DACT2Q5SW24 774 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 FKBP15Q5T1M5 1219 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 KRT40Q6A162 431 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 CPLX2Q6PUV4 134 aaKnown RBP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 TOGARAM2Q6ZUX3 1019 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 FGD2Q7Z6J4 655 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 MRGPREQ86SM8 312 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 ELOA2Q8IYF1 753 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 FAM186BQ8IYM0 893 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 CLASRPQ8N2M8 674 aaKnown RBP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 MB21D1Q8N884 522 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 KIAA1958Q8N8K9 716 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 HAS1Q92839 578 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 GJA10Q969M2 543 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 MYD88Q99836 296 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 NUDT16L1Q9BRJ7 211 aaKnown RBP4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 BOCQ9BWV1 1114 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 AP1M1Q9BXS5 423 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 ASPSCR1Q9BZE9 553 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 CXorf56Q9H5V9 222 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 IL23AQ9NPF7 189 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 TMCC3Q9ULS5 477 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 DGKBQ9Y6T7 804 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 XDHP47989 1333 aa4.17□□□□□ -1.74
HMGB3P15-201ENST00000507326 GTPBP10A4D1E9 387 aaKnown RBP4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 F5H423 210 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 PRLP01236 227 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 PSMA3P25788 255 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 KIF5BP33176 963 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 MAPK9P45984 424 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 RENBPP51606 427 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 KIF11P52732 1056 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 RABGGTBP53611 331 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 AK2P54819 239 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 SMAD3P84022 425 aaKnown RBP4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 ELF2Q15723 593 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 PDXDC1Q6P996 788 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 OTOP1Q7RTM1 612 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 SPATS2Q86XZ4 545 aaKnown RBP4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 BRSK2Q8IWQ3 736 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 OR8H2Q8N162 312 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 JMYQ8N9B5 988 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 PLA2G15Q8NCC3 412 aa4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 SLC25A43Q8WUT9 341 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P15-201ENST00000507326 ATXN2LQ8WWM7 1075 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms