RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 DNM3Q9UQ16 869 aa6.35□□□□□ -1.39
UBE2D3-218ENST00000505009 MAP3K2Q9Y2U5 619 aa6.35□□□□□ -1.39
UBE2D3-218ENST00000505009 SBNO2Q9Y2G9 1366 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 RNASET2O00584 256 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 PJA2O43164 708 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 RAMP2O60895 175 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 RAP2AP10114 183 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 AGXTP21549 392 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 MGAT1P26572 445 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 PCSK1P29120 753 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 GUCY1A2P33402 732 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 IARSP41252 1262 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 DPF2Q92785 391 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 PRRX2Q99811 253 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 MRI1Q9BV20 369 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 SENP6Q9GZR1 1112 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 ZNF277Q9NRM2 450 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 DKK2Q9UBU2 259 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 AJAP1Q9UKB5 411 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 ATP8A1Q9Y2Q0 1164 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 ACTL7AQ9Y615 435 aa6.34□□□□□ -1.39
UBE2D3-218ENST00000505009 GRID2IPA4D2P6 1211 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 UNC119BA6NIH7 251 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 PROZP22891 400 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 COL10A1Q03692 680 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 MGAT2Q10469 447 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 SP140Q13342 867 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 PTPAQ15257 358 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 INAVAQ3KP66 663 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 MED25Q71SY5 747 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 NECAB2Q7Z6G3 386 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 ZGPATQ8N5A5 531 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 CPEB3Q8NE35 698 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 GPR150Q8NGU9 434 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 CCHCR1Q8TD31 782 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 SSH1Q8WYL5 1049 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 PUS7LQ9H0K6 701 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 LANCL2Q9NS86 450 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 SLC23A1Q9UHI7 598 aa6.33□□□□□ -1.4
UBE2D3-218ENST00000505009 CADPSQ9ULU8 1353 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 TMEM191CA6NGB0 347 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 TMEM200CA6NKL6 621 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 OVOL3O00110 214 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 MT-CO1P00395 513 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 AMY1AP04745 511 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 SLC6A2P23975 617 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 CDKN1CP49918 316 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 CLUL1Q15846 466 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 PLXDC1Q8IUK5 500 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 NRG4Q8WWG1 115 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 ADAM2Q99965 735 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 CCDC8Q9H0W5 538 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 FBXO34Q9NWN3 711 aa6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 RUVBL1Q9Y265 456 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-218ENST00000505009 GAGE12BA1L429 117 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 CCDC78A2IDD5 438 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 PRSS23O95084 383 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 ELANEP08246 267 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 IL2RBP14784 551 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 ATP5JP18859 108 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 RRP12Q5JTH9 1297 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 AGAP9Q5VTM2 703 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 AMOTL1Q8IY63 956 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 BEND2Q8NDZ0 799 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 OR56A1Q8NGH5 318 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 RAB24Q969Q5 203 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 ZSWIM1Q9BR11 485 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 SERHL2Q9H4I8 314 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 TUBD1Q9UJT1 453 aa6.31□□□□□ -1.4
UBE2D3-218ENST00000505009 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 MARCH11A6NNE9 402 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 ENDOD1O94919 500 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 ZEB1P37275 1124 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 PURAQ00577 322 aaKnown RBP6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 TP53BP2Q13625 1128 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 ABCB5Q2M3G0 1257 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 ZNF529Q6P280 563 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 PGM2L1Q6PCE3 622 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 UBE3BQ7Z3V4 1068 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 ARHGEF19Q8IW93 802 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 C1orf162Q8NEQ5 155 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 JADE3Q92613 823 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 KLHL11Q9NVR0 708 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 MOCS1Q9NZB8 636 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
UBE2D3-218ENST00000505009 PCDHGA12O60330 932 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 SPDEFO95238 335 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 GCP02774 474 aa6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 DDX6P26196 483 aaKnown RBP eCLIP6.29□□□□□ -1.4
UBE2D3-218ENST00000505009 INHBEP58166 350 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms