RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DDX60Q8IY21 1712 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 MAPK13O15264 365 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 RNF8O76064 485 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 RTN3O95197 1032 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 OAS1P00973 400 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 FESP07332 822 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 TMEM253P0C7T8 217 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 T-ENOLP0DO92 83 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PCP11498 1178 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 GNAZP19086 355 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 RRM1P23921 792 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 CDR2Q01850 454 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PLCB3Q01970 1234 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PPATQ06203 517 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PPP2R5CQ13362 524 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 THOC5Q13769 683 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SLC1A5Q15758 541 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SLC47A2Q86VL8 602 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 RFWD2Q8NHY2 731 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 NRG4Q8WWG1 115 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 STMN2Q93045 179 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 DNAJC1Q96KC8 554 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ZSWIM1Q9BR11 485 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SHCBP1LQ9BZQ2 653 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 LRRC27Q9C0I9 530 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 INTS2Q9H0H0 1204 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 CD209Q9NNX6 404 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 NINJ2Q9NZG7 142 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 MARCOQ9UEW3 520 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ASTN1O14525 1302 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 GYG2O15488 501 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 AHCYL1O43865 530 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 OPHN1O60890 802 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ATF2P15336 505 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ALDH3A1P30838 453 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 FMO5P49326 533 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 POLGP54098 1239 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 MYL7Q01449 175 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ROR2Q01974 943 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 STRN3Q13033 797 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 MTFR1Q15390 333 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 ZNF365Q70YC5 407 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 HS2ST1Q7LGA3 356 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 EFCAB3Q8N7B9 438 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SEC14L1Q92503 715 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 KIFAP3Q92845 792 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 SLC7A6OSQ96CW6 309 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PHF12Q96QT6 1004 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PCDHB18PQ96TA0 734 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 AGPAT1Q99943 283 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 MOV10L1Q9BXT6 1211 aaKnown RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 TMX4Q9H1E5 349 aaPredicted RBP8.12□□□□□ -1.11
NEDD9-208ENST00000504387 VCXQ9H320 206 aa8.12□□□□□ -1.11
NEDD9-208ENST00000504387 PITPNM2Q9BZ72 1349 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 PODXLO00592 558 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 TBX10O75333 385 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 TTC4O95801 387 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SPATA31D3P0C874 917 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 PYGBP11216 843 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 FGFR1P11362 822 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 CD58P19256 250 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 RPL13P26373 211 aaKnown RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 CETN2P41208 172 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ICA1Q05084 483 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 TRAF1Q13077 416 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 EFTUD2Q15029 972 aaKnown RBP eCLIP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 TBC1D25Q3MII6 688 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 LRRC23Q53EV4 343 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ACSBG2Q5FVE4 666 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 DPY19L2P1Q6NXN4 242 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SPATA31D4Q6ZUB0 917 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 NLRP9Q7RTR0 991 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 FRMD5Q7Z6J6 570 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 PASD1Q8IV76 773 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 CEP120Q8N960 986 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 GLIS1Q8NBF1 620 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ZNF564Q8TBZ8 553 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SNRNP27Q8WVK2 155 aaKnown RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 NMD3Q96D46 503 aaKnown RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 FAM161BQ96MY7 647 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 MIPEPQ99797 713 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ZC3H12CQ9C0D7 883 aaKnown RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 JMJD4Q9H9V9 463 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 ARL8BQ9NVJ2 186 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 SLC4A7Q9Y6M7 1214 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 CES2O00748 559 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 TGFB1I1O43294 461 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 CFBP00751 764 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 KRT10P13645 584 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 KRT5P13647 590 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 PLS3P13797 630 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 GSTT1P30711 240 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 MRPS35P82673 323 aaKnown RBP8.11□□□□□ -1.11
NEDD9-208ENST00000504387 KDSRQ06136 332 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 CUL3Q13618 768 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 PDIA5Q14554 519 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 PPP1R18Q6NYC8 613 aa8.11□□□□□ -1.11
NEDD9-208ENST00000504387 LVRNQ6Q4G3 990 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms