RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 FAM81BQ96LP2 452 aa15.88■□□□□ 0.13
CHTOP-206ENST00000495554 ZSWIM1Q9BR11 485 aa15.88■□□□□ 0.13
CHTOP-206ENST00000495554 CELF4Q9BZC1 486 aaKnown RBP15.88■□□□□ 0.13
CHTOP-206ENST00000495554 SPATC1LQ9H0A9 340 aa15.88■□□□□ 0.13
CHTOP-206ENST00000495554 NEUROG2Q9H2A3 272 aa15.88■□□□□ 0.13
CHTOP-206ENST00000495554 TOPORSQ9NS56 1045 aaPredicted RBP15.88■□□□□ 0.13
CHTOP-206ENST00000495554 MAFBQ9Y5Q3 323 aaPredicted RBP15.88■□□□□ 0.13
CHTOP-206ENST00000495554 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 ZC3H11AO75152 810 aaKnown RBP eCLIP15.87■□□□□ 0.13
CHTOP-206ENST00000495554 DR1Q01658 176 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 GCNT1Q02742 428 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 ZNF211Q13398 564 aaPredicted RBP15.87■□□□□ 0.13
CHTOP-206ENST00000495554 MTMR3Q13615 1198 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 KCTD16Q68DU8 428 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 GADL1Q6ZQY3 521 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 SEPT14Q6ZU15 432 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 POLR3FQ9H1D9 316 aaPredicted RBP15.87■□□□□ 0.13
CHTOP-206ENST00000495554 WNT8AQ9H1J5 351 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 KIAA1586Q9HCI6 787 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 ACP6Q9NPH0 428 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 GTF3C4Q9UKN8 822 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 GOLGA6L10A6NI86 522 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 CNMDO75829 334 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 CYP1A2P05177 515 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 COMTP21964 271 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 EDNRBP24530 442 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 DHX34Q14147 1143 aaKnown RBP15.87■□□□□ 0.13
CHTOP-206ENST00000495554 MESDQ14696 234 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 EMC10Q5UCC4 262 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 ATP6V1G3Q96LB4 118 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 FAM213AQ9BRX8 229 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 TRPC6Q9Y210 931 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 MYH9P35579 1960 aaKnown RBP15.87■□□□□ 0.13
CHTOP-206ENST00000495554 A0A0G2JMZ2 1700 aa15.87■□□□□ 0.13
CHTOP-206ENST00000495554 FAM187AA6NFU0 413 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 HMGB1P1B2RPK0 211 aaPredicted RBP15.86■□□□□ 0.13
CHTOP-206ENST00000495554 SCP2P22307 547 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 SH2D3CQ8N5H7 860 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 KRT35Q92764 455 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 CEP89Q96ST8 783 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.86■□□□□ 0.13
CHTOP-206ENST00000495554 UVRAGQ9P2Y5 699 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 FBXO40Q9UH90 709 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 IGKV6D-21A0A0A0MT36 114 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 TMEM110-MUSTN1A8MSY1 372 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 EXTL3O43909 919 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 YBX3P16989 372 aaKnown RBP eCLIP15.86■□□□□ 0.131e-10■■□□□ 12.9
CHTOP-206ENST00000495554 IREB2P48200 963 aaKnown RBP15.86■□□□□ 0.13
CHTOP-206ENST00000495554 LIG4P49917 911 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 PEX5P50542 639 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 MTERF2Q49AM1 385 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 CEP85LQ5SZL2 805 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 FOXR1Q6PIV2 292 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 ADAT2Q7Z6V5 191 aaKnown RBP15.86■□□□□ 0.13
CHTOP-206ENST00000495554 ZNF513Q8N8E2 541 aaPredicted RBP15.86■□□□□ 0.13
CHTOP-206ENST00000495554 ZNF564Q8TBZ8 553 aaPredicted RBP15.86■□□□□ 0.13
CHTOP-206ENST00000495554 DDX1Q92499 740 aaKnown RBP15.86■□□□□ 0.13
CHTOP-206ENST00000495554 NCAPGQ9BPX3 1015 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 ERP44Q9BS26 406 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 NUP85Q9BW27 656 aa15.86■□□□□ 0.13
CHTOP-206ENST00000495554 GSTTP1A0A1W2PQM5 241 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 EIF3HO15372 352 aaKnown RBP eCLIP15.85■□□□□ 0.138e-7■■■■■ 40.7
CHTOP-206ENST00000495554 GGPS1O95749 300 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 CTNNA1P35221 906 aaKnown RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 POLGP54098 1239 aaPredicted RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 GNGT1P63211 74 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 CLDN10P78369 228 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 EMC2Q15006 297 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 UAP1Q16222 522 aaPredicted RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 DNAJC21Q5F1R6 531 aaKnown RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 KDM7AQ6ZMT4 941 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 NCAPG2Q86XI2 1143 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 ERO1BQ86YB8 467 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 KCNN1Q92952 543 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 CD101Q93033 1021 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 TATDN2Q93075 761 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 ZNF653Q96CK0 615 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 PCYT2Q99447 389 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 ERVK-5Q9HDB9 667 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 H0YGN5 161 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 KIAA0391O15091 583 aaKnown RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 ATMINO43313 823 aaPredicted RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 MYZAPP0CAP1 466 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 STRN3Q13033 797 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 DUPD1Q68J44 220 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 ACAD10Q6JQN1 1059 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 C15orf39Q6ZRI6 1047 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 TMC3Q7Z5M5 1100 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 TRIM51Q9BSJ1 452 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 DPH5Q9H2P9 285 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 ZNF302Q9NR11 478 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 C1orf112Q9NSG2 853 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 CHORDC1Q9UHD1 332 aaPredicted RBP15.85■□□□□ 0.13
CHTOP-206ENST00000495554 NFS1Q9Y697 457 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 GRIN2DO15399 1336 aa15.85■□□□□ 0.13
CHTOP-206ENST00000495554 CXCL11O14625 94 aa15.84■□□□□ 0.13
CHTOP-206ENST00000495554 GRIN3BO60391 1043 aa15.84■□□□□ 0.13
CHTOP-206ENST00000495554 UBA1P22314 1058 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms