RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PABPC1LQ4VXU2 614 aaKnown RBP15.76■□□□□ 0.11
VARS-228ENST00000495010 VARS2Q5ST30 1063 aaKnown RBP15.76■□□□□ 0.11
VARS-228ENST00000495010 ZBTB41Q5SVQ8 909 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 AXDND1Q5T1B0 1012 aaPredicted RBP15.76■□□□□ 0.11
VARS-228ENST00000495010 RSPO2Q6UXX9 243 aaPredicted RBP15.76■□□□□ 0.11
VARS-228ENST00000495010 GPR161Q8N6U8 529 aaKnown RBP15.76■□□□□ 0.11
VARS-228ENST00000495010 SUMF1Q8NBK3 374 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 ITFG1Q8TB96 612 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 KXD1Q9BQD3 176 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 ADPGKQ9BRR6 497 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 TTC12Q9H892 705 aaPredicted RBP15.76■□□□□ 0.11
VARS-228ENST00000495010 GJB4Q9NTQ9 266 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 SNTG2Q9NY99 539 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 PCDHGA2Q9Y5H1 932 aa15.76■□□□□ 0.11
VARS-228ENST00000495010 MIA3Q5JRA6 1907 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 MYH15Q9Y2K3 1946 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 XRCC6P12956 609 aaKnown RBP eCLIP15.75■□□□□ 0.11
VARS-228ENST00000495010 ATP2B1P20020 1258 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 OR1D2P34982 312 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 TXKP42681 527 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 EARS2Q5JPH6 523 aaKnown RBP15.75■□□□□ 0.11
VARS-228ENST00000495010 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.75■□□□□ 0.11
VARS-228ENST00000495010 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 MAML2Q8IZL2 1156 aaPredicted RBP15.75■□□□□ 0.11
VARS-228ENST00000495010 MCPH1Q8NEM0 835 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 NELL2Q99435 816 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 DDX23Q9BUQ8 820 aaKnown RBP15.75■□□□□ 0.11
VARS-228ENST00000495010 C2orf40Q9H1Z8 148 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 LTB4R2Q9NPC1 389 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 DLL3Q9NYJ7 618 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 KCNH3Q9ULD8 1083 aa15.75■□□□□ 0.11
VARS-228ENST00000495010 MRPS23Q9Y3D9 190 aaKnown RBP15.75■□□□□ 0.11
VARS-228ENST00000495010 MTF2Q9Y483 593 aaPredicted RBP15.75■□□□□ 0.11
VARS-228ENST00000495010 VPS13AQ96RL7 3174 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 LIG1P18858 919 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 CD72P21854 359 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 NR5A1Q13285 461 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 PRPF4BQ13523 1007 aaKnown RBP15.74■□□□□ 0.11
VARS-228ENST00000495010 RAB33AQ14088 237 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 TPRG1Q6ZUI0 275 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 ING5Q8WYH8 240 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 GPRC5CQ9NQ84 441 aa15.74■□□□□ 0.11
VARS-228ENST00000495010 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
VARS-228ENST00000495010 MRPS17Q9Y2R5 130 aaKnown RBP15.74■□□□□ 0.11
VARS-228ENST00000495010 FANCMQ8IYD8 2048 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 A0A087WWV3 80 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 FAM205CA6NFA0 338 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 PTGESO14684 152 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 ADAM12O43184 909 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 NEMFO60524 1076 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 RECQL4O94761 1208 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 POU2F2P09086 479 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 MAPK6Q16659 721 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 FAM187BQ17R55 369 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 ZNF852Q6ZMS4 543 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 RTL10Q7L3V2 364 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 NOSTRINQ8IVI9 506 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 NPAS3Q8IXF0 933 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 MCRS1Q96EZ8 462 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 FZD8Q9H461 694 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 PDZD7Q9H5P4 517 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 HCFC1R1Q9NWW0 138 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 ZSCAN32Q9NX65 697 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 DNMT3BQ9UBC3 853 aaKnown RBP15.73■□□□□ 0.11
VARS-228ENST00000495010 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 CDY1Q9Y6F8 540 aa15.73■□□□□ 0.11
VARS-228ENST00000495010 CACNA1AO00555 2505 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 ZNF292O60281 2723 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 TRAPPC3O43617 180 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 PFKFB2O60825 505 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 ECI2O75521 394 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 B3GAT3O94766 335 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 PRKCBP05771 671 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 ELF1P32519 619 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 CDCA2Q69YH5 1023 aaPredicted RBP15.72■□□□□ 0.11
VARS-228ENST00000495010 APBB1IPQ7Z5R6 666 aaPredicted RBP15.72■□□□□ 0.11
VARS-228ENST00000495010 DEPTORQ8TB45 409 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 GDE1Q9NZC3 331 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 CACNA1IQ9P0X4 2223 aa15.72■□□□□ 0.11
VARS-228ENST00000495010 PRR5-ARHGAP8B1AHC4 643 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 DTNBO60941 627 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 LRG1P02750 347 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 FGFR3P22607 806 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 ARHGAP8P85298 464 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 DCAF4L1Q3SXM0 396 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 ANKS3Q6ZW76 656 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 UROC1Q96N76 676 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 NACC1Q96RE7 527 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 MTRRQ9UBK8 725 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 GMEB2Q9UKD1 530 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 CDV3Q9UKY7 258 aaKnown RBP15.71■□□□□ 0.11
VARS-228ENST00000495010 USP18Q9UMW8 372 aa15.71■□□□□ 0.11
VARS-228ENST00000495010 SMG5Q9UPR3 1016 aaKnown RBP15.71■□□□□ 0.11
VARS-228ENST00000495010 DOCK6Q96HP0 2047 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 DCHS1Q96JQ0 3298 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 ACKR2O00590 384 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 RHOP08100 348 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 PTPN2P17706 415 aa15.7■□□□□ 0.1
VARS-228ENST00000495010 TARSP26639 723 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms