RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	MASP2	O00187	686 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	CDKL5	O76039	1030 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	FOS	P01100	380 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	RAP2A	P10114	183 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	PLA2G5	P39877	138 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	SEC24C	P53992	1094 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	MRPS9	P82933	396 aa	Known RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	FOXI1	Q12951	378 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	CCDC142	Q17RM4	750 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	RRP12	Q5JTH9	1297 aa	Known RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	AGAP9	Q5VTM2	703 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650		Q6ZVL8	140 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	STRA8	Q7Z7C7	330 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	THNSL2	Q86YJ6	484 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	TRMT2A	Q8IZ69	625 aa	Known RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	PQLC1	Q8N2U9	271 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	OR7D4	Q8NG98	312 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	OR56A1	Q8NGH5	318 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	STON2	Q8WXE9	905 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	ASB10	Q8WXI3	467 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	LINC00476	Q8WZB0	136 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	VOPP1	Q96AW1	172 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	ADAM2	Q99965	735 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	REXO4	Q9GZR2	422 aa	Known RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	SLK	Q9H2G2	1235 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	BCO1	Q9HAY6	547 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	TES	Q9UGI8	421 aa	Known RBP	4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	ZBTB21	Q9ULJ3	1066 aa		4.57	□□□□□ -1.68
VPS36-205	ENST00000492650	PNPLA7	Q6ZV29	1317 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	CFI	P05156	583 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	MTHFD2	P13995	350 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	ALOX15	P16050	662 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	CXCR5	P32302	372 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	CLK3	P49761	638 aa	Known RBP	4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	BLOC1S1	P78537	153 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	MUM1L1	Q5H9M0	696 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	ARMC6	Q6NXE6	501 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	NOP9	Q86U38	636 aa	Known RBP	4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	PRIMA1	Q86XR5	153 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	MAPKAPK5	Q8IW41	473 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	RHOT2	Q8IXI1	618 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	SLC44A3	Q8N4M1	653 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	TSPEAR	Q8WU66	669 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	ZNF764	Q96H86	408 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	MRI1	Q9BV20	369 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	ACE2	Q9BYF1	805 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	RSAD1	Q9HA92	442 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	IFT122	Q9HBG6	1241 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	MOCS1	Q9NZB8	636 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	INSL6	Q9Y581	213 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	NOX1	Q9Y5S8	564 aa		4.56	□□□□□ -1.68
VPS36-205	ENST00000492650	BRINP1	O60477	761 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	ESRRB	O95718	433 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	POMC	P01189	267 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	EGR2	P11161	476 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	IL2RB	P14784	551 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	ATP5J	P18859	108 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	SOX5	P35711	763 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	SP140	Q13342	867 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	MPP3	Q13368	585 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	NOMO1	Q15155	1222 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	ADRM1	Q16186	407 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	MUM1	Q2TAK8	710 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	TOR2A	Q5JU69	321 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	GJC2	Q5T442	439 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	AFMID	Q63HM1	303 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	RD3	Q7Z3Z2	195 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	TMEM132C	Q8N3T6	1108 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	LMBR1	Q8WVP7	490 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	RNF31	Q96EP0	1072 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	BBC3	Q96PG8	261 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	ZSWIM1	Q9BR11	485 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	POLR3GL	Q9BT43	218 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	ADI1	Q9BV57	179 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	ALOXE3	Q9BYJ1	711 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	LDAH	Q9H6V9	325 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	GREM2	Q9H772	168 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	CAAP1	Q9H8G2	361 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	RBM12	Q9NTZ6	932 aa	Known RBP	4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	KLHL11	Q9NVR0	708 aa		4.55	□□□□□ -1.68
VPS36-205	ENST00000492650	ATRNL1	Q5VV63	1379 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	SPATA31A6	Q5VVP1	1343 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650		A0A1B0GTW7	788 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	MARCH11	A6NNE9	402 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	WNT10B	O00744	389 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	ELANE	P08246	267 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	GSPT1	P15170	499 aa	Known RBP	4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	FBL	P22087	321 aa	Known RBP	4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	LMO1	P25800	156 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	CD38	P28907	300 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	SREBF1	P36956	1147 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	TMPRSS15	P98073	1019 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	UBXN2B	Q14CS0	331 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	PRR16	Q569H4	304 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	FBXO42	Q6P3S6	717 aa		4.54	□□□□□ -1.68
VPS36-205	ENST00000492650	SYCE2	Q6PIF2	218 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms