RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CD302Q8IX05 232 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 C12orf56Q8IXR9 622 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 TMEM192Q8IY95 271 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 NELFBQ8WX92 580 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 ZNF689Q96CS4 500 aaPredicted RBP12.39□□□□□ -0.43
NUP50-216ENST00000486184 SNX27Q96L92 541 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 ZFP42Q96MM3 310 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 CASD1Q96PB1 797 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 NKX2-4Q9H2Z4 354 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 PLEKHA5Q9HAU0 1116 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 AAASQ9NRG9 546 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
NUP50-216ENST00000486184 CPSF3Q9UKF6 684 aaKnown RBP12.39□□□□□ -0.43
NUP50-216ENST00000486184 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 RWDD3Q9Y3V2 267 aa12.39□□□□□ -0.43
NUP50-216ENST00000486184 CARNS1A5YM72 827 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 CETN3O15182 167 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 XPOTO43592 962 aaKnown RBP12.38□□□□□ -0.43
NUP50-216ENST00000486184 THP07101 528 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 MYOGP15173 224 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 BMP6P22004 513 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 DNAJB2P25686 324 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 PBX2P40425 430 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 POU5F1Q01860 360 aaKnown RBP12.38□□□□□ -0.43
NUP50-216ENST00000486184 ADAM9Q13443 819 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 MYBPC2Q14324 1141 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 SNRNP35Q16560 246 aaKnown RBP12.38□□□□□ -0.43
NUP50-216ENST00000486184 TPD52L1Q16890 204 aaPredicted RBP12.38□□□□□ -0.43
NUP50-216ENST00000486184 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 CENPPQ6IPU0 288 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 RDH13Q8NBN7 331 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
NUP50-216ENST00000486184 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 RC3H2Q9HBD1 1191 aaKnown RBP12.38□□□□□ -0.43
NUP50-216ENST00000486184 RNF19AQ9NV58 838 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 ANO10Q9NW15 660 aa12.38□□□□□ -0.43
NUP50-216ENST00000486184 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 TRIM49BA6NDI0 452 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 INPPL1O15357 1258 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 FAM189A1O60320 539 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 ZC3H11AO75152 810 aaKnown RBP eCLIP12.37□□□□□ -0.43
NUP50-216ENST00000486184 FGFR1OPO95684 399 aaKnown RBP12.37□□□□□ -0.43
NUP50-216ENST00000486184 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 LAG3P18627 525 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 STX17P56962 302 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 FKBP3Q00688 224 aaKnown RBP12.37□□□□□ -0.43
NUP50-216ENST00000486184 SURF1Q15526 300 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 ENOX2Q16206 610 aaKnown RBP12.37□□□□□ -0.43
NUP50-216ENST00000486184 NFIL3Q16649 462 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 DPCR1Q3MIW9 517 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 GLRA4Q5JXX5 417 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 ANKRD40Q6AI12 368 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 USP37Q86T82 979 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 SLC9A9Q8IVB4 645 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 FNBP1Q96RU3 617 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 TSPAN18Q96SJ8 248 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 ASB7Q9H672 318 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 CNTN3Q9P232 1028 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 YBX2Q9Y2T7 364 aaKnown RBP12.37□□□□□ -0.43
NUP50-216ENST00000486184 PCDHB12Q9Y5F1 795 aa12.37□□□□□ -0.43
NUP50-216ENST00000486184 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
NUP50-216ENST00000486184 MRPL42Q9Y6G3 142 aaKnown RBP12.37□□□□□ -0.43
NUP50-216ENST00000486184 TRIOBPQ9H2D6 2365 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 COL4A4P53420 1690 aaPredicted RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 SMIM28A0A1B0GU29 152 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 TTC26A0AVF1 554 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 SYCE3A1L190 88 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 LINC01553A4QN01 128 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 LACTBL1A8MY62 500 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 EPB41P11171 864 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 KRT13P13646 458 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 CTNNB1P35222 781 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 PSMC2P35998 433 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 ALDH7A1P49419 539 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 TUSC3Q13454 348 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 TMEM132DQ14C87 1099 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 SLC10A6Q3KNW5 377 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 ZCWPW2Q504Y3 356 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 CT47A1Q5JQC4 288 aaPredicted RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 CBWD2Q8IUF1 395 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 CSGALNACT2Q8N6G5 542 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 CACTINQ8WUQ7 758 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 TGS1Q96RS0 853 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 NAT10Q9H0A0 1025 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 RWDD2AQ9UIY3 292 aa12.36□□□□□ -0.43
NUP50-216ENST00000486184 UBQLN1Q9UMX0 589 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 R3HCC1Q9Y3T6 440 aaKnown RBP12.36□□□□□ -0.43
NUP50-216ENST00000486184 PTGESO14684 152 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms