RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 TCEAL5Q5H9L2 206 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 SLFN12LQ6IEE8 588 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 ALKAL1Q6UXT8 129 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 STXBP4Q6ZWJ1 553 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 POMGNT1Q8WZA1 660 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 SNX27Q96L92 541 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 PAAF1Q9BRP4 392 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 TLR9Q9NR96 1032 aa20.59■□□□□ 0.89
AGRN-208ENST00000479707 SMIM28A0A1B0GU29 152 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 TULP1O00294 542 aaPredicted RBP20.58■□□□□ 0.89
AGRN-208ENST00000479707 CLTAP09496 248 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 CXCL8P10145 99 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 CA8P35219 290 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 SPAG1Q07617 926 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 TUSC3Q13454 348 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 SNW1Q13573 536 aaKnown RBP20.58■□□□□ 0.89
AGRN-208ENST00000479707 SLC10A6Q3KNW5 377 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 TIGD5Q53EQ6 642 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 PLPP4Q5VZY2 271 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 TMC7Q7Z402 723 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 NELFCDQ8IXH7 590 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 ENGASEQ8NFI3 743 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 FAM212AQ96EL1 285 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 ZMAT2Q96NC0 199 aaKnown RBP20.58■□□□□ 0.89
AGRN-208ENST00000479707 TCF25Q9BQ70 676 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 COLEC11Q9BWP8 271 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 NSUN3Q9H649 340 aaKnown RBP20.58■□□□□ 0.89
AGRN-208ENST00000479707 TMEM206Q9H813 350 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 ENTPD7Q9NQZ7 604 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 EXOC1Q9NV70 894 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 AGO2Q9UKV8 859 aaKnown RBP20.58■□□□□ 0.89
AGRN-208ENST00000479707 LZTS1Q9Y250 596 aa20.58■□□□□ 0.89
AGRN-208ENST00000479707 RPN1P04843 607 aaKnown RBP20.57■□□□□ 0.88
AGRN-208ENST00000479707 ADSSP30520 456 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 ACOT2P49753 483 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 FAM160A1Q05DH4 1040 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 DPYDQ12882 1025 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 NAB2Q15742 525 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 ADGRD2Q7Z7M1 963 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 RBM23Q86U06 439 aaKnown RBP20.57■□□□□ 0.88
AGRN-208ENST00000479707 ZNF507Q8TCN5 953 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 NOC3LQ8WTT2 800 aaKnown RBP20.57■□□□□ 0.88
AGRN-208ENST00000479707 PPP1R10Q96QC0 940 aaKnown RBP20.57■□□□□ 0.88
AGRN-208ENST00000479707 PCIF1Q9H4Z3 704 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 IGFLR1Q9H665 355 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 RPF1Q9H9Y2 349 aaKnown RBP20.57■□□□□ 0.88
AGRN-208ENST00000479707 GOLGA2P5Q9HBQ8 144 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 MARCH5Q9NX47 278 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 STYXL1Q9Y6J8 313 aa20.57■□□□□ 0.88
AGRN-208ENST00000479707 CARNS1A5YM72 827 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 FAM189A1O60320 539 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 MYL1P05976 194 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 HOXD13P35453 343 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 STK4Q13043 487 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 POSTNQ15063 836 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 XKR4Q5GH76 650 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 KANK3Q6NY19 840 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 EPM2AIP1Q7L775 607 aaPredicted RBP20.56■□□□□ 0.88
AGRN-208ENST00000479707 DDX53Q86TM3 631 aaKnown RBP20.56■□□□□ 0.88
AGRN-208ENST00000479707 VPS52Q8N1B4 723 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 ZSWIM2Q8NEG5 633 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 HASPINQ8TF76 798 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 AUTS2Q8WXX7 1259 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 SAAL1Q96ER3 474 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 VN1R3Q9BXE9 311 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 CNTN3Q9P232 1028 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 TRANK1O15050 2925 aa20.56■□□□□ 0.88
AGRN-208ENST00000479707 GOLGA8IPA6NC78 632 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 GOLGA8JA6NMD2 632 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 LACTBL1A8MY62 500 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 FSCN2O14926 492 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 EIF3DO15371 548 aaKnown RBP eCLIP20.55■□□□□ 0.88
AGRN-208ENST00000479707 GTF2F1P35269 517 aaKnown RBP eCLIP20.55■□□□□ 0.88
AGRN-208ENST00000479707 SOX4Q06945 474 aaPredicted RBP20.55■□□□□ 0.88
AGRN-208ENST00000479707 PNOCQ13519 176 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 ENOX2Q16206 610 aaKnown RBP20.55■□□□□ 0.88
AGRN-208ENST00000479707 KYAT1Q16773 422 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 EP400NLQ6ZTU2 488 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 TAS1R1Q7RTX1 841 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 C18orf25Q96B23 403 aaPredicted RBP20.55■□□□□ 0.88
AGRN-208ENST00000479707 CCDC34Q96HJ3 373 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 CBWD1Q9BRT8 395 aa20.55■□□□□ 0.88
AGRN-208ENST00000479707 CPSF3Q9UKF6 684 aaKnown RBP20.55■□□□□ 0.88
AGRN-208ENST00000479707 PDCD11Q14690 1871 aaKnown RBP20.54■□□□□ 0.88
AGRN-208ENST00000479707 TTC26A0AVF1 554 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 HIDE1A8MVS5 230 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 PER2O15055 1255 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 PRPF40AO75400 957 aaKnown RBP20.54■□□□□ 0.88
AGRN-208ENST00000479707 TADA2AO75478 443 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 CXCL14O95715 111 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 KCNE1P15382 129 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 CLCNKBP51801 687 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 PPP2R3AQ06190 1150 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 PSMD2Q13200 908 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 HSP90AA2PQ14568 343 aaPredicted RBP20.54■□□□□ 0.88
AGRN-208ENST00000479707 ARMCX5Q6P1M9 558 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 TMEM130Q8N3G9 435 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 TMEM87AQ8NBN3 555 aa20.54■□□□□ 0.88
AGRN-208ENST00000479707 KIAA0895Q8NCT3 520 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms