RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	IPP	Q9Y573	584 aa		11.43	□□□□□ -0.58
PUM1-208	ENST00000471894	SCN5A	Q14524	2016 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894		A0A0U1RQF3	1178 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	ZNF623	O75123	536 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	CXCL10	P02778	98 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	ITGA4	P13612	1032 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	AKAP5	P24588	427 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	GTF2H1	P32780	548 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	RFC2	P35250	354 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	GCLM	P48507	274 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	FMO5	P49326	533 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	RAB27A	P51159	221 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	WNT7B	P56706	349 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	MCCD1	P59942	119 aa	Predicted RBP	11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	SLC10A6	Q3KNW5	377 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	C1orf220	Q5T0J3	134 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	CD302	Q8IX05	232 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	TMEM199	Q8N511	208 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	SMG8	Q8ND04	991 aa	Known RBP	11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	MRFAP1L1	Q96HT8	127 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	HTATIP2	Q9BUP3	242 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	TRAIP	Q9BWF2	469 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	ASB7	Q9H672	318 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	PLEKHA5	Q9HAU0	1116 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	RGS18	Q9NS28	235 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	INTS13	Q9NVM9	706 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	CIT	O14578	2027 aa		11.42	□□□□□ -0.58
PUM1-208	ENST00000471894	TET1	Q8NFU7	2136 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	TTC26	A0AVF1	554 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	ENPP3	O14638	875 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	N4BP1	O75113	896 aa	Known RBP	11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	RECQL4	O94761	1208 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	ITGB8	P26012	769 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	AP3M2	P53677	418 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	CLDN10	P78369	228 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	TFAM	Q00059	246 aa	Known RBP	11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	PPP3CA	Q08209	521 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	CETN1	Q12798	172 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	PTPN21	Q16825	1174 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	DUOXA2	Q1HG44	320 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	MFSD5	Q6N075	450 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	SLC24A5	Q71RS6	500 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	MRPL10	Q7Z7H8	261 aa	Known RBP	11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	ECHDC2	Q86YB7	292 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	WDR49	Q8IV35	697 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	C7orf61	Q8IZ16	206 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	RPUSD2	Q8IZ73	545 aa	Known RBP	11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	TNS4	Q8IZW8	715 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	RNF169	Q8NCN4	708 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	CACTIN	Q8WUQ7	758 aa	Known RBP	11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	ZNF516	Q92618	1163 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	PGBD4	Q96DM1	585 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	CGRRF1	Q99675	332 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	TMEM8A	Q9HCN3	771 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	C1orf112	Q9NSG2	853 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	KLK14	Q9P0G3	267 aa		11.41	□□□□□ -0.58
PUM1-208	ENST00000471894	TANC1	Q9C0D5	1861 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	TRIP11	Q15643	1979 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894		C9IYK1	514 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	P4HA2	O15460	535 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	EVI5	O60447	810 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	PHACTR2	O75167	634 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	EOMES	O95936	686 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	TNNC2	P02585	160 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	TMEM191B	P0C7N4	346 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	CSF2RA	P15509	400 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	MXI1	P50539	228 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	FAM189B	P81408	668 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	MYL7	Q01449	175 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	BIRC3	Q13489	604 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	IKBKE	Q14164	716 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	TMEM132D	Q14C87	1099 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	SYCP1	Q15431	976 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	EXOC3L4	Q17RC7	722 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	CBWD6	Q4V339	395 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	CBWD3	Q5JTY5	395 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	CBWD5	Q5RIA9	395 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	KRT39	Q6A163	491 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	JADE1	Q6IE81	842 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	CNKSR3	Q6P9H4	555 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	ALKAL1	Q6UXT8	129 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	GBP6	Q6ZN66	633 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	SV2A	Q7L0J3	742 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	DPF3	Q92784	378 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	LPP	Q93052	612 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	KIF12	Q96FN5	646 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	ANKRD36BP1	Q96IX9	119 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	SNX27	Q96L92	541 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	ERGIC2	Q96RQ1	377 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	CRACR2A	Q9BSW2	395 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	TMEM117	Q9H0C3	514 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894	GIT1	Q9Y2X7	761 aa		11.4	□□□□□ -0.58
PUM1-208	ENST00000471894		A0A1W2PQC6	194 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms