RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GTPBP4Q9BZE4 634 aaKnown RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 NT5C3AQ9H0P0 336 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 TNMDQ9H2S6 317 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 AGO4Q9HCK5 861 aaKnown RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 TUFT1Q9NNX1 390 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 SSU72Q9NP77 194 aaKnown RBP6.13□□□□□ -1.43
VPS41-211ENST00000466017 KBTBD4Q9NVX7 518 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 SLC5A4Q9NY91 659 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 VTI1BQ9UEU0 232 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 LRWD1Q9UFC0 647 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 SAMM50Q9Y512 469 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 KDM3AQ9Y4C1 1321 aa6.13□□□□□ -1.43
VPS41-211ENST00000466017 IPO5O00410 1097 aaKnown RBP6.12□□□□□ -1.43
VPS41-211ENST00000466017 DKC1O60832 514 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS41-211ENST00000466017 SLITRK5O94991 958 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 EOMESO95936 686 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 ZNF16P17020 682 aaPredicted RBP6.12□□□□□ -1.43
VPS41-211ENST00000466017 TAL1P17542 331 aaPredicted RBP6.12□□□□□ -1.43
VPS41-211ENST00000466017 GARTP22102 1010 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 SFNP31947 248 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 GP2P55259 537 aaKnown RBP6.12□□□□□ -1.43
VPS41-211ENST00000466017 AMPD3Q01432 767 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 GRB14Q14449 540 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 TMEM119Q4V9L6 283 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 NAALADL2Q58DX5 795 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 RRAGBQ5VZM2 374 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 ZNF746Q6NUN9 644 aaPredicted RBP6.12□□□□□ -1.43
VPS41-211ENST00000466017 PLEKHH3Q7Z736 793 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 CEP57L1Q8IYX8 460 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 ANKRD13CQ8N6S4 541 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 FBXO27Q8NI29 283 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 CYP2W1Q8TAV3 490 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 USP6NLQ92738 828 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 ELMO3Q96BJ8 720 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 FGD4Q96M96 766 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 GSDMAQ96QA5 445 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 C7orf25Q9BPX7 421 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 ZNF577Q9BSK1 485 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 PAGR1Q9BTK6 254 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 TEKT3Q9BXF9 490 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 PORCNQ9H237 461 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 KCNH7Q9NS40 1196 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 HOMER2Q9NSB8 354 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 ZNFX1Q9P2E3 1918 aaKnown RBP6.12□□□□□ -1.43
VPS41-211ENST00000466017 VAV3Q9UKW4 847 aa6.12□□□□□ -1.43
VPS41-211ENST00000466017 ABT1Q9ULW3 272 aaKnown RBP6.12□□□□□ -1.43
VPS41-211ENST00000466017 ASTN1O14525 1302 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 A0A087X0B3 334 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 PVALEFA0A1B0GWK0 134 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 FSD2A1L4K1 749 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 GAS7O60861 476 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 SLITRK3O94933 977 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 CCDC192P0DO97 292 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 MYCLP12524 364 aaPredicted RBP6.11□□□□□ -1.43
VPS41-211ENST00000466017 KCNA2P16389 499 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 GRK4P32298 578 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 ST13P50502 369 aaKnown RBP6.11□□□□□ -1.43
VPS41-211ENST00000466017 JAK3P52333 1124 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 OXCT1P55809 520 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 RPS26P62854 115 aaKnown RBP6.11□□□□□ -1.43
VPS41-211ENST00000466017 CNTN2Q02246 1040 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 GRB10Q13322 594 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 CAMK2GQ13555 558 aaPredicted RBP6.11□□□□□ -1.43
VPS41-211ENST00000466017 MTMR1Q13613 665 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 NEDD9Q14511 834 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 KCNB1Q14721 858 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 COBLL1Q53SF7 1204 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 SPECC1Q5M775 1068 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 TMCO4Q5TGY1 634 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 LRCH2Q5VUJ6 765 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 CCDC62Q6P9F0 684 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 GPR142Q7Z601 462 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 HOMEZQ8IX15 550 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 C4orf19Q8IY42 314 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 SMAP1Q8IYB5 467 aaPredicted RBP6.11□□□□□ -1.43
VPS41-211ENST00000466017 IL31RAQ8NI17 732 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 PAGE5Q96GU1 130 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 CAPNS2Q96L46 248 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 WNT10AQ9GZT5 417 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 NRBP1Q9UHY1 535 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 GJD2Q9UKL4 321 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 RBBP6Q7Z6E9 1792 aaKnown RBP6.11□□□□□ -1.43
VPS41-211ENST00000466017 UTRNP46939 3433 aa6.11□□□□□ -1.43
VPS41-211ENST00000466017 IGKV6D-21A0A0A0MT36 114 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 FAM221AA4D161 298 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 PRR33A8MZF0 331 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 UPK3BL1B0FP48 263 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 UPK3BL2E5RIL1 263 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 NKRFO15226 690 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS41-211ENST00000466017 FANCGO15287 622 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 ATP9AO75110 1047 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 SMC2O95347 1197 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 EYA4O95677 639 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 ADORA2AP29274 412 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 PPP1R2P41236 205 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 STAT6P42226 847 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 POSTNQ15063 836 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 OLFML2BQ68BL8 750 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 IQSEC1Q6DN90 963 aa6.1□□□□□ -1.43
VPS41-211ENST00000466017 CYP4F22Q6NT55 531 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms