RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 CETN3O15182 167 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CLIC2O15247 247 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 INPPL1O15357 1258 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 TRAPPC3O43617 180 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CLSTN1O94985 981 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 EDN1P05305 212 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 TMEM191BP0C7N4 346 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CXCL8P10145 99 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 EPB41P11171 864 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 KRT13P13646 458 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 MYOGP15173 224 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 NR2F2P24468 414 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 BMPR1AP36894 532 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 PRCPP42785 496 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 OR1G1P47890 313 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ACOT2P49753 483 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 GATMP50440 423 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CYP2J2P51589 502 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ERVK-21P61565 698 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 UBE3AQ05086 875 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ELAVL2Q12926 359 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 PAK1Q13153 545 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 TMEM132DQ14C87 1099 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 SNRNP35Q16560 246 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 EDRF1Q3B7T1 1238 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 EPC2Q52LR7 807 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 COBLL1Q53SF7 1204 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CEP135Q66GS9 1140 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ISM2Q6H9L7 571 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 KLHL10Q6JEL2 608 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 KCNT2Q6UVM3 1135 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 C12orf56Q8IXR9 622 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CRIPAKQ8N1N5 446 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CEP120Q8N960 986 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 MLKLQ8NB16 471 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 BEST2Q8NFU1 509 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 SPATA20Q8TB22 786 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ARNTL2Q8WYA1 636 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ERCC4Q92889 916 aaPredicted RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CLP1Q92989 425 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 SAAL1Q96ER3 474 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 KIF12Q96FN5 646 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 DDX27Q96GQ7 796 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 SNX27Q96L92 541 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CBWD1Q9BRT8 395 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 FGFBP2Q9BYJ0 223 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 LMAN2LQ9H0V9 348 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 RNF39Q9H2S5 420 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 PCIF1Q9H4Z3 704 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 RC3H2Q9HBD1 1191 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 AGPAT3Q9NRZ7 376 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 SPG21Q9NZD8 308 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 HSPBP1Q9NZL4 362 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 CPSF3Q9UKF6 684 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 MAN1B1Q9UKM7 699 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 DERAQ9Y315 318 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 C2CD2Q9Y426 696 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 MRPL42Q9Y6G3 142 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 MTCL1Q9Y4B5 1905 aaKnown RBP6.93□□□□□ -1.3
SF3B1-206ENST00000462613 SCN1AP35498 2009 aa6.93□□□□□ -1.3
SF3B1-206ENST00000462613 SMIM28A0A1B0GU29 152 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 TTC26A0AVF1 554 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 FSD2A1L4K1 749 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 GOLGA8IPA6NC78 632 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 GOLGA8JA6NMD2 632 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 MEIS3P2A8K0S8 358 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 C5orf67F2Z3F1 127 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 ABLIM1O14639 778 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 TGFB1I1O43294 461 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 TNNC2P02585 160 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 NR3C1P04150 777 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 KCNE1P15382 129 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 TNNI1P19237 187 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 PAX3P23760 479 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 CCNE1P24864 410 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 RPL9P32969 192 aaKnown RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 CA8P35219 290 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 TNFSF9P41273 254 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 AP3M2P53677 418 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 BCAR1P56945 870 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 FKBP3Q00688 224 aaKnown RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 ADAM9Q13443 819 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 GPM6BQ13491 265 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 MORC3Q14149 939 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 NFIL3Q16649 462 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 KLHL40Q2TBA0 621 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 SEZ6Q53EL9 994 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 CT47A1Q5JQC4 288 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 GLRA4Q5JXX5 417 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 KIAA1841Q6NSI8 718 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 CAVIN1Q6NZI2 390 aaKnown RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 SLC39A4Q6P5W5 647 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 INTS8Q75QN2 995 aaKnown RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 SLC9A9Q8IVB4 645 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 BRSK2Q8IWQ3 736 aa6.92□□□□□ -1.3
SF3B1-206ENST00000462613 SMYD4Q8IYR2 804 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-206ENST00000462613 DEFB123Q8N688 67 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms