RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CMAS	Q8NFW8	434 aa	Predicted RBP	13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	DHX58	Q96C10	678 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	FBXL18	Q96ME1	805 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	RPS6KC1	Q96S38	1066 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	REEP2	Q9BRK0	252 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	RXFP1	Q9HBX9	757 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	MRPL17	Q9NRX2	175 aa	Known RBP	13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	CHST7	Q9NS84	486 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	BLOC1S4	Q9NUP1	217 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	KCND2	Q9NZV8	630 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	SSX2IP	Q9Y2D8	614 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	USP20	Q9Y2K6	914 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	ZDHHC9	Q9Y397	364 aa		13.96	□□□□□ -0.17
FDPS-204	ENST00000461507	PHLPP2	Q6ZVD8	1323 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507		K7ENM7	598 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507		K7ERI5	159 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	HARS	P12081	509 aa	Known RBP	13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	MATR3	P43243	847 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	GLUD2	P49448	558 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	DSG1	Q02413	1049 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	STRN3	Q13033	797 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	C15orf39	Q6ZRI6	1047 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	SV2B	Q7L1I2	683 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	C12orf76	Q8N812	135 aa	Predicted RBP	13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	LRRC15	Q8TF66	581 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	BICD1	Q96G01	975 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	ADPGK	Q9BRR6	497 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	PDZD7	Q9H5P4	517 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	LARS	Q9P2J5	1176 aa	Known RBP	13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	PCDHA7	Q9UN72	937 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	DOCK8	Q8NF50	2099 aa		13.95	□□□□□ -0.18
FDPS-204	ENST00000461507	VWA8	A3KMH1	1905 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	TTLL13P	A6NNM8	815 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507		F8W810	466 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	ACKR2	O00590	384 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	N4BP3	O15049	544 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	EDN1	P05305	212 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	PLS3	P13797	630 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	IDE	P14735	1019 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	DDIT3	P35638	169 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	OR1G1	P47890	313 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	EFNA5	P52803	228 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	MAPK7	Q13164	816 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	ATAT1	Q5SQI0	421 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	DAW1	Q8N136	415 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	FBXL6	Q8N531	539 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	TDRD5	Q8NAT2	981 aa	Known RBP	13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	TMEM87A	Q8NBN3	555 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	FEZF2	Q8TBJ5	459 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	GDPD2	Q9HCC8	539 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	PARP2	Q9UGN5	583 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	ODF2L	Q9ULJ1	636 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	SORCS3	Q9UPU3	1222 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507	TRIP11	Q15643	1979 aa		13.94	□□□□□ -0.18
FDPS-204	ENST00000461507		A0A087X0B3	334 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	TULP1	O00294	542 aa	Predicted RBP	13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	TEX28	O15482	410 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	NR1I2	O75469	434 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	ADH1A	P07327	375 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	WEE2	P0C1S8	567 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	AKAP5	P24588	427 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	KLRC2	P26717	231 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	NHLH1	Q02575	133 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	NAB2	Q15742	525 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	ARSH	Q5FYA8	562 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	ATF7IP2	Q5U623	682 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	KANK3	Q6NY19	840 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	FUT10	Q6P4F1	479 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	SHC4	Q6S5L8	630 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	CYP26C1	Q6V0L0	522 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	TAS1R1	Q7RTX1	841 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	ZBTB33	Q86T24	672 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	UBALD2	Q8IYN6	164 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	KREMEN2	Q8NCW0	462 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	HDAC7	Q8WUI4	952 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	LEO1	Q8WVC0	666 aa	Predicted RBP	13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	STAM	Q92783	540 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	PBXIP1	Q96AQ6	731 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	TCHP	Q9BT92	498 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	COLEC11	Q9BWP8	271 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	MRPL4	Q9BYD3	311 aa	Known RBP	13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	C17orf75	Q9HAS0	396 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	PARVG	Q9HBI0	331 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	ANKFY1	Q9P2R3	1169 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	ADAM28	Q9UKQ2	775 aa		13.93	□□□□□ -0.18
FDPS-204	ENST00000461507	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.93	□□□□□ -0.18
FDPS-204	ENST00000461507		H0YCG3	227 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	PTGES	O14684	152 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	POLR2D	O15514	142 aa	Known RBP	13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	SP100	P23497	879 aa	Predicted RBP	13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	TUSC3	Q13454	348 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	MTMR3	Q13615	1198 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	ZNF568	Q3ZCX4	644 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	TMC5	Q6UXY8	1006 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	CCDC149	Q6ZUS6	474 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	PLCD3	Q8N3E9	789 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	DDX12P	Q92771	950 aa		13.92	□□□□□ -0.18
FDPS-204	ENST00000461507	PRRX2	Q99811	253 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms