RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 MTM1Q13496 603 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 SAFB2Q14151 953 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 SURF1Q15526 300 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 KHDC1Q4VXA5 237 aaKnown RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 ARHGEF18Q6ZSZ5 1173 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 CCDC149Q6ZUS6 474 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 FAM156AQ8NDB6 213 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 MTFMTQ96DP5 389 aaKnown RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 C12orf65Q9H3J6 166 aaKnown RBP5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 NELFAQ9H3P2 528 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 LMBRD1Q9NUN5 540 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 USP40Q9NVE5 1235 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 MOCS1Q9NZB8 636 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 OAZ3Q9UMX2 235 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 L1RE1Q9UN81 338 aa5.49□□□□□ -1.53
HMGB1P16-201ENST00000447155 DHX57Q6P158 1386 aaKnown RBP5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 A0A1W2PRX2 142 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 FTH1P19P0C7X4 201 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 ALOX15P16050 662 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 CR2P20023 1033 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 MALP21145 153 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 CFPP27918 469 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 SMARCA1P28370 1054 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 PCSK1P29120 753 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 MRPL49Q13405 166 aaKnown RBP5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 SNAPC2Q13487 334 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 KIAA0753Q2KHM9 967 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 FAM47AQ5JRC9 791 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 DARS2Q6PI48 645 aaKnown RBP5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 HEATR3Q7Z4Q2 680 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 C11orf96Q7Z7L8 435 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 FBXO18Q8NFZ0 1043 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZSCAN18Q8TBC5 510 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 STON2Q8WXE9 905 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 LMF1Q96S06 567 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 VRK1Q99986 396 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 TCF25Q9BQ70 676 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 USP25Q9UHP3 1055 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 FAM50BQ9Y247 325 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 PCDHA3Q9Y5H8 950 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 ACTL7AQ9Y615 435 aa5.48□□□□□ -1.53
HMGB1P16-201ENST00000447155 WIZO95785 1651 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZMYM3Q14202 1370 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 ATRNL1Q5VV63 1379 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 UBE2QL1A1L167 161 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 GOLIM4O00461 696 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 APAF1O14727 1248 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 TRIM13O60858 407 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 TYRP14679 529 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 FPR1P21462 350 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 EPHB4P54760 987 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 RHBDL3P58872 404 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 ZNF280AP59817 542 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 RAB1AP62820 205 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 NKX6-1P78426 367 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 PTH1RQ03431 593 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 PICALMQ13492 652 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 FGL2Q14314 439 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 CNN3Q15417 329 aaKnown RBP5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 ATP2B3Q16720 1220 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 MAEAQ7L5Y9 396 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 GPR135Q8IZ08 494 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 PLBD2Q8NHP8 589 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 ARL8AQ96BM9 186 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 CEP95Q96GE4 821 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 BORCS6Q96GS4 357 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 LRRC37BQ96QE4 947 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 DPYSL5Q9BPU6 564 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 WDCPQ9H6R7 721 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 AGO3Q9H9G7 860 aaKnown RBP5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 PNPOQ9NVS9 261 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 ABCF2Q9UG63 623 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 FEZ2Q9UHY8 353 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 CLIP1P30622 1438 aa5.47□□□□□ -1.53
HMGB1P16-201ENST00000447155 ABCC8Q09428 1581 aa5.46□□□□□ -1.53
HMGB1P16-201ENST00000447155 DBX1A6NMT0 343 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 NT5C1B-RDH14C9J2C7 533 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 H3BUI4 141 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 HOXA3O43365 443 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 LAMTOR5O43504 91 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 CDC14BO60729 498 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 RPS19P39019 145 aaKnown RBP5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 ALDH1A3P47895 512 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 SEMA5AQ13591 1074 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 MFSD14BQ5SR56 506 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 SYCP2LQ5T4T6 812 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 RNF220Q5VTB9 566 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 AFMIDQ63HM1 303 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 SLFN13Q68D06 897 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 OTUD7BQ6GQQ9 843 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 PLXDC1Q8IUK5 500 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 SYT8Q8NBV8 401 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 SLC35A4Q96G79 324 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 C11orf54Q9H0W9 315 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 KCNH6Q9H252 994 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 ARMT1Q9H993 441 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 CHST12Q9NRB3 414 aa5.46□□□□□ -1.54
HMGB1P16-201ENST00000447155 RUVBL1Q9Y265 456 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms