RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MFSD14BQ5SR56 506 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 FAM102BQ5T8I3 360 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 NXNQ6DKJ4 435 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 USP45Q70EL2 814 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 HTR3DQ70Z44 454 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 GPRIN1Q7Z2K8 1008 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 FAM83AQ86UY5 434 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 XYLT1Q86Y38 959 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 REPS2Q8NFH8 660 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 CEP95Q96GE4 821 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 CPEB1Q9BZB8 566 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 NMRK2Q9NPI5 230 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 AJAP1Q9UKB5 411 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 CLCA2Q9UQC9 943 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 HDAC5Q9UQL6 1122 aa4.78□□□□□ -1.64
TRAPPC13-204ENST00000438419 ATRNL1Q5VV63 1379 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 XDHP47989 1333 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 PJA2O43164 708 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 OFD1O75665 1012 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 ALOX15P16050 662 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 HSPA6P17066 643 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 PDCP20941 246 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 METTL24Q5JXM2 366 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 IFIT1BQ5T764 474 aaKnown RBP4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 THEMIS2Q5TEJ8 643 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 ANKS6Q68DC2 871 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 RNF207Q6ZRF8 634 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 TTC7BQ86TV6 843 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 RSPH3Q86UC2 560 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 TMPRSS6Q8IU80 811 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 GSPT2Q8IYD1 628 aaKnown RBP4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 TCEAL8Q8IYN2 117 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 PRR18Q8N4B5 295 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 MB21D1Q8N884 522 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 CCHCR1Q8TD31 782 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 ATXN2LQ8WWM7 1075 aaKnown RBP4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 KCNH6Q9H252 994 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 CEP72Q9P209 647 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 PCDHA13Q9Y5I0 950 aa4.77□□□□□ -1.65
TRAPPC13-204ENST00000438419 MYBBP1AQ9BQG0 1328 aaKnown RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 PRR5-ARHGAP8B1AHC4 643 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 SNRPA1P09661 255 aaKnown RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 HK1P19367 917 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 DDCP20711 480 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 MAN2A2P49641 1150 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 DGCR2P98153 550 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 MTM1Q13496 603 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 IL10RAQ13651 578 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 RAB39AQ14964 217 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 LRRC41Q15345 812 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 ATP2B3Q16720 1220 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 NRN1LQ496H8 165 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 DCAF17Q5H9S7 520 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 NAIF1Q69YI7 327 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 CATIPQ7Z7H3 387 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 C1orf210Q8IVY1 113 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 DRC7Q8IY82 874 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 FBXO18Q8NFZ0 1043 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 OR52N2Q8NGI0 321 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 NSUN6Q8TEA1 469 aaKnown RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 KAT5Q92993 513 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 ZNF503Q96F45 646 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 MAP3K14Q99558 947 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 MNTQ99583 582 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 CPPED1Q9BRF8 314 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 ZNF747Q9BV97 191 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 GPR87Q9BY21 358 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 GTPBP4Q9BZE4 634 aaKnown RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 LDAHQ9H6V9 325 aa4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 ZNF703Q9H7S9 590 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-204ENST00000438419 GRXCR1A8MXD5 290 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 SLC16A6O15403 523 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 AMHP03971 560 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 AMY1AP04745 511 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 C1SP09871 688 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 ALDH1A3P47895 512 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 TARDBPQ13148 414 aaKnown RBP eCLIP4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 FOXE3Q13461 319 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 PGS1Q32NB8 556 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 ATAT1Q5SQI0 421 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 AFMIDQ63HM1 303 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 OTUD7BQ6GQQ9 843 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 FMNL3Q8IVF7 1028 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 TPH2Q8IWU9 490 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 MAGEB6Q8N7X4 407 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 SLC35B2Q8TB61 432 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 HPS3Q969F9 1004 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 PGBD4Q96DM1 585 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 CLIP3Q96DZ5 547 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 MVB12AQ96EY5 273 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 TMX3Q96JJ7 454 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 SLC12A5Q9H2X9 1139 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 MAN1C1Q9NR34 630 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 CALCOCO1Q9P1Z2 691 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 CHPF2Q9P2E5 772 aa4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 NOB1Q9ULX3 412 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-204ENST00000438419 GOLGA6CA6NDK9 693 aa4.74□□□□□ -1.65
TRAPPC13-204ENST00000438419 GOLGA6BA6NDN3 693 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms