RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 BRAPQ7Z569 592 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 SUGP1Q8IWZ8 645 aaKnown RBP10.19□□□□□ -0.78
NUP50-206ENST00000422489 RNF168Q8IYW5 571 aaPredicted RBP10.19□□□□□ -0.78
NUP50-206ENST00000422489 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 CEP120Q8N960 986 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 ZBTB45Q96K62 511 aaPredicted RBP10.19□□□□□ -0.78
NUP50-206ENST00000422489 ACAP3Q96P50 834 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 TTPALQ9BTX7 342 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 TIPINQ9BVW5 301 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 CDT1Q9H211 546 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 ZHX3Q9H4I2 956 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 C17orf75Q9HAS0 396 aa10.19□□□□□ -0.78
NUP50-206ENST00000422489 PHLPP2Q6ZVD8 1323 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 WDR81Q562E7 1941 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 SMIM28A0A1B0GU29 152 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 MCF2P10911 925 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 PDCP20941 246 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 IGFBP6P24592 240 aaPredicted RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 GBP2P32456 591 aaPredicted RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 GRM5P41594 1212 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 CLCNKBP51801 687 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 SLC12A3P55017 1021 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 CREMQ03060 361 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 CEBPZQ03701 1054 aaKnown RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 GRIN1Q05586 938 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 ELAVL2Q12926 359 aaKnown RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 CUL4AQ13619 759 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 NAB2Q15742 525 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 PSMD5Q16401 504 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 ARSHQ5FYA8 562 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 HYIQ5T013 277 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 C15orf39Q6ZRI6 1047 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 OTOP3Q7RTS5 596 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 TAS1R3Q7RTX0 852 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 BMP8AQ7Z5Y6 402 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 GPBP1Q86WP2 473 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 ZDHHC14Q8IZN3 488 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 KCTD17Q8N5Z5 321 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 MYCT1Q8N699 235 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 LNX1Q8TBB1 728 aaPredicted RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 SMG7Q92540 1137 aaKnown RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 BICD1Q96G01 975 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 AK8Q96MA6 479 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 NTPCRQ9BSD7 190 aaKnown RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 PLEKHA4Q9H4M7 779 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 GOLGA2P5Q9HBQ8 144 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 TOPORSQ9NS56 1045 aaPredicted RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 FNIP2Q9P278 1114 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 LARSQ9P2J5 1176 aaKnown RBP10.18□□□□□ -0.78
NUP50-206ENST00000422489 ARHGAP28Q9P2N2 729 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 CLIC4Q9Y696 253 aa10.18□□□□□ -0.78
NUP50-206ENST00000422489 ZMYM2Q9UBW7 1377 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 I3L4J1 428 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 TRAPPC3O43617 180 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 FAM13AO94988 1023 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 BRD1O95696 1058 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 BMP15O95972 392 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 MAPTP10636 758 aaKnown RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 LONP1P36776 959 aaKnown RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 BRCC3P46736 316 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 MTMR3Q13615 1198 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 MCM6Q14566 821 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 KARSQ15046 597 aaKnown RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 TMEM119Q4V9L6 283 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 LILRA6Q6PI73 481 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 MPZL3Q6UWV2 235 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 UBALD2Q8IYN6 164 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 FBXL6Q8N531 539 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 TMEM161BQ8NDZ6 487 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 CMASQ8NFW8 434 aaPredicted RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 HDAC7Q8WUI4 952 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 UROC1Q96N76 676 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 PPP1R10Q96QC0 940 aaKnown RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 CLSTN3Q9BQT9 956 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 BACH2Q9BYV9 841 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 SMOC2Q9H3U7 446 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 PTPRHQ9HD43 1115 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 ANKFY1Q9P2R3 1169 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 POLIQ9UNA4 740 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 SORCS3Q9UPU3 1222 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 USTQ9Y2C2 406 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
NUP50-206ENST00000422489 BRWD1Q9NSI6 2320 aa10.17□□□□□ -0.78
NUP50-206ENST00000422489 ATG2AQ2TAZ0 1938 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 CLDN3O15551 220 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 ADAM12O43184 909 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 TOM1L1O75674 476 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 ZMYND10O75800 440 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 PDGFBP01127 241 aaPredicted RBP10.16□□□□□ -0.78
NUP50-206ENST00000422489 PLCG1P19174 1290 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 SYT1P21579 422 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 MARCKSP29966 332 aaPredicted RBP10.16□□□□□ -0.78
NUP50-206ENST00000422489 OR1D2P34982 312 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 ARPP19P56211 112 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 SPAG1Q07617 926 aa10.16□□□□□ -0.78
NUP50-206ENST00000422489 UPP1Q16831 310 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms