RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CREMQ03060 361 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 NAB2Q15742 525 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 RINT1Q6NUQ1 792 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 LILRA6Q6PI73 481 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 SPATA31D4Q6ZUB0 917 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 C1orf186Q6ZWK4 172 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 OTOP3Q7RTS5 596 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 APBB1IPQ7Z5R6 666 aaPredicted RBP10.38□□□□□ -0.75
NUP50-205ENST00000419387 PALB2Q86YC2 1186 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 DAW1Q8N136 415 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 RIN2Q8WYP3 895 aaPredicted RBP10.38□□□□□ -0.75
NUP50-205ENST00000419387 MMTAG2Q9BU76 263 aaKnown RBP10.38□□□□□ -0.75
NUP50-205ENST00000419387 RHOBTB2Q9BYZ6 727 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 CACNG4Q9UBN1 327 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 TNFSF13BQ9Y275 285 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 GDAQ9Y2T3 454 aa10.38□□□□□ -0.75
NUP50-205ENST00000419387 SF3B1O75533 1304 aaKnown RBP eCLIP10.37□□□□□ -0.752e-7■■■■■ 41.4
NUP50-205ENST00000419387 HIP1RO75146 1068 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 MYBP10242 640 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 RPL17P18621 184 aaKnown RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 ATP2C1P98194 919 aaPredicted RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 ELAVL2Q12926 359 aaKnown RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 DMP1Q13316 513 aaPredicted RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 RTP2Q5QGT7 225 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 HYIQ5T013 277 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 PRSS55Q6UWB4 352 aaPredicted RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 KCNK18Q7Z418 384 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 CEP57Q86XR8 500 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 HASPINQ8TF76 798 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 DRC1Q96MC2 740 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 ACO2Q99798 780 aaKnown RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 PRRX2Q99811 253 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 TTPALQ9BTX7 342 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 RUSC1Q9BVN2 902 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 TIPINQ9BVW5 301 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 NT5C3AQ9H0P0 336 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 C17orf75Q9HAS0 396 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 WDR6Q9NNW5 1121 aaKnown RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 KMT5AQ9NQR1 393 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 SMC3Q9UQE7 1217 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
NUP50-205ENST00000419387 MYO10Q9HD67 2058 aa10.37□□□□□ -0.75
NUP50-205ENST00000419387 PHLPP2Q6ZVD8 1323 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 MUC6Q6W4X9 2439 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 SFI1A8K8P3 1242 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 RFPL2O75678 378 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 KIF4AO95239 1232 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 PAPLNO95428 1278 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 PDGFBP01127 241 aaPredicted RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 AVPR2P30518 371 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 MAPK7Q13164 816 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 ZRSR1Q15695 479 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 FAM171A1Q5VUB5 890 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 ARL6IP4Q66PJ3 421 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 DCLRE1AQ6PJP8 1040 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 TAS1R3Q7RTX0 852 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 ALYREFQ86V81 257 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 SYT2Q8N9I0 419 aaPredicted RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 PRSS33Q8NF86 280 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 PIK3R5Q8WYR1 880 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 SMG7Q92540 1137 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 STAMQ92783 540 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 ZNF707Q96C28 371 aaPredicted RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 PPP1R10Q96QC0 940 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 CLSTN3Q9BQT9 956 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 NTPCRQ9BSD7 190 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 CCDC94Q9BW85 323 aaPredicted RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 MRPL4Q9BYD3 311 aaKnown RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 SMOC2Q9H3U7 446 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 PIDD1Q9HB75 910 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 PTPRHQ9HD43 1115 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 ZDHHC7Q9NXF8 308 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 ARHGAP28Q9P2N2 729 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 KCNG1Q9UIX4 513 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.36□□□□□ -0.75
NUP50-205ENST00000419387 ZNF318Q5VUA4 2279 aa10.36□□□□□ -0.75
NUP50-205ENST00000419387 SMIM28A0A1B0GU29 152 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 VWA3AA6NCI4 1184 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 TMEM189-UBE2V1I3L0A0 370 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 SLC16A4O15374 487 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 N4BP1O75113 896 aaKnown RBP10.35□□□□□ -0.75
NUP50-205ENST00000419387 GUCY2CP25092 1073 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 GBP2P32456 591 aaPredicted RBP10.35□□□□□ -0.75
NUP50-205ENST00000419387 GRM5P41594 1212 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 CLCNKBP51801 687 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 PTPN5P54829 565 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 VCPP55072 806 aaKnown RBP10.35□□□□□ -0.75
NUP50-205ENST00000419387 TDGQ13569 410 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 PSMD5Q16401 504 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 GLRA4Q5JXX5 417 aa10.35□□□□□ -0.75
NUP50-205ENST00000419387 LARP1BQ659C4 914 aaKnown RBP10.35□□□□□ -0.75
NUP50-205ENST00000419387 PDXDC1Q6P996 788 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms