RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 AGO4Q9HCK5 861 aaKnown RBP5.04□□□□□ -1.6
SF3B1-202ENST00000409915 PDLIM7Q9NR12 457 aa5.04□□□□□ -1.6
SF3B1-202ENST00000409915 TMEM39AQ9NV64 488 aa5.04□□□□□ -1.6
SF3B1-202ENST00000409915 BTBD7Q9P203 1132 aa5.04□□□□□ -1.6
SF3B1-202ENST00000409915 RBPJLQ9UBG7 517 aa5.04□□□□□ -1.6
SF3B1-202ENST00000409915 CYP8B1Q9UNU6 501 aa5.04□□□□□ -1.6
SF3B1-202ENST00000409915 JRKLQ9Y4A0 524 aa5.04□□□□□ -1.6
SF3B1-202ENST00000409915 PCDHGB6Q9Y5F9 930 aa5.04□□□□□ -1.6
SF3B1-202ENST00000409915 A0A0G2JMZ2 1700 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 BRCA2P51587 3418 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GOLGA6L6A8MZA4 724 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 TMEM232C9JQI7 657 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 TNPO2O14787 897 aaKnown RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 XPOTO43592 962 aaKnown RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 HTR3BO95264 441 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 FKBP9O95302 570 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ZBED1O96006 694 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 CFBP00751 764 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GOLGA8HP0CJ92 632 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 NAT2P11245 290 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 TOP1P11387 765 aaKnown RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 PCP11498 1178 aaKnown RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 CPA1P15085 419 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ACPPP15309 386 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 NME1P15531 152 aaKnown RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 U2AF2P26368 475 aaKnown RBP eCLIP5.03□□□□□ -1.63e-9■■■■■ 43.7
SF3B1-202ENST00000409915 KRT20P35900 424 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 SLC16A2P36021 539 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 SLC1A4P43007 532 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 RAD52P43351 418 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GCLCP48506 637 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GABREP78334 506 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 PRKCZQ05513 592 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 BTKQ06187 659 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 IKQ13123 557 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 PPFIA1Q13136 1202 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ZNF267Q14586 743 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 KIF22Q14807 665 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 NECTIN1Q15223 517 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 RABEP1Q15276 862 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ADCK5Q3MIX3 580 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 RPS26P11Q5JNZ5 115 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 RETSATQ6NUM9 610 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 LLGL2Q6P1M3 1020 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 CCDC149Q6ZUS6 474 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 FKBP9P1Q75LS8 142 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GPR155Q7Z3F1 870 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 RAB11FIP4Q86YS3 637 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 MB21D2Q8IYB1 491 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 NXPE1Q8N323 547 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GOLGA6L1Q8N7Z2 621 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 FAM156AQ8NDB6 213 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GMCL1P1Q8NEA9 526 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GPRC5AQ8NFJ5 357 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 NCOA7Q8NI08 942 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 KIF18AQ8NI77 898 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 DEPTORQ8TB45 409 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 PPP1R14AQ96A00 147 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 TBC1D20Q96BZ9 403 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ZBTB9Q96C00 473 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GBP4Q96PP9 640 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 TBCBQ99426 244 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 SLF1Q9BQI6 1058 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 UBAC1Q9BSL1 405 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 MYL10Q9BUA6 226 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 SLC26A6Q9BXS9 759 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 KRT23Q9C075 422 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 RNF38Q9H0F5 515 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ZNF576Q9H609 170 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 FAM204AQ9H8W3 233 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ARFGAP3Q9NP61 516 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 TBC1D22BQ9NU19 505 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 TCP11L1Q9NUJ3 509 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 MKS1Q9NXB0 559 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ZDHHC3Q9NYG2 299 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 ZSWIM5Q9P217 1185 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 PDP2Q9P2J9 529 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 MORF4L1Q9UBU8 362 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 PPP1R9AQ9ULJ8 1098 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GABRQQ9UN88 632 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 MAGED1Q9Y5V3 778 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 MRFAP1Q9Y605 127 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 GPC6Q9Y625 555 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-202ENST00000409915 RLFQ13129 1914 aa5.03□□□□□ -1.6
SF3B1-202ENST00000409915 PARP14Q460N5 1801 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 MYPNQ86TC9 1320 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 RRN3P2A6NIE6 340 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 RASA4BC9J798 803 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 GOLGA6L22H0YM25 854 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 VWA5AO00534 786 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 TOR1BO14657 336 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 IFIT3O14879 490 aaKnown RBP5.02□□□□□ -1.61
SF3B1-202ENST00000409915 RASA4O43374 803 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 BAIAP3O94812 1187 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 HNRNPCP07910 306 aaKnown RBP eCLIP5.02□□□□□ -1.61
SF3B1-202ENST00000409915 PDHBP11177 359 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 BMP3P12645 472 aa5.02□□□□□ -1.61
SF3B1-202ENST00000409915 GLULP15104 373 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms