RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TRIM43BA6NCK2 446 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 EMP3P54852 163 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 CCDC92Q53HC0 331 aaPredicted RBP13.6□□□□□ -0.23
HERC3-203ENST00000407637 FAM26FQ5R3K3 315 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 RAD54LQ92698 747 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 CYLDQ9NQC7 956 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 TAS2R1Q9NYW7 299 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 STK17AQ9UEE5 414 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 ZMYM2Q9UBW7 1377 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 VILLO15195 856 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 TMEM253P0C7T8 217 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 HSPA6P17066 643 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 CETN2P41208 172 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 OVGP1Q12889 678 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 CLUL1Q15846 466 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 KBTBD12Q3ZCT8 623 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 B3GNT6Q6ZMB0 384 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
HERC3-203ENST00000407637 RFWD2Q8NHY2 731 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 POLR3CQ9BUI4 534 aaPredicted RBP13.6□□□□□ -0.23
HERC3-203ENST00000407637 THAP2Q9H0W7 228 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 USP29Q9HBJ7 922 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 SH3GLB2Q9NR46 395 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
HERC3-203ENST00000407637 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.6□□□□□ -0.23
HERC3-203ENST00000407637 CCDC160A6NGH7 325 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 ZFXP17010 805 aaPredicted RBP13.6□□□□□ -0.23
HERC3-203ENST00000407637 CYP7A1P22680 504 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 ANXA13P27216 316 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 PGM1P36871 562 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 JAM2P57087 298 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 FYB2Q5VWT5 728 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 FOXR2Q6PJQ5 311 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 RGS9BPQ6ZS82 235 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 TRIM67Q6ZTA4 783 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 LRRC43Q8N309 656 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 GAB3Q8WWW8 586 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 HSPBAP1Q96EW2 488 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 NSL1Q96IY1 281 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 RANBP17Q9H2T7 1088 aaKnown RBP13.6□□□□□ -0.23
HERC3-203ENST00000407637 PFDN4Q9NQP4 134 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 BTBD7Q9P203 1132 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 ASIC3Q9UHC3 531 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 ZNF180Q9UJW8 692 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 ACTL7BQ9Y614 415 aa13.6□□□□□ -0.23
HERC3-203ENST00000407637 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.6□□□□□ -0.23
HERC3-203ENST00000407637 ARAP2Q8WZ64 1704 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 A8MXQ7 604 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 TCEA3O75764 348 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 RPA3P35244 121 aaPredicted RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 GSTM4Q03013 218 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 KRT17Q04695 432 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 CYLC2Q14093 348 aaPredicted RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 LRRC36Q1X8D7 754 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 DCAF17Q5H9S7 520 aaPredicted RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 RHBDF2Q6PJF5 856 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 SLC15A3Q8IY34 581 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 C4orf33Q8N1A6 199 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 DENND1AQ8TEH3 1009 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 BRD8Q9H0E9 1235 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 FBXO6Q9NRD1 293 aaPredicted RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 HEY2Q9UBP5 337 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 PPM1HQ9ULR3 514 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 ALG6Q9Y672 507 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 A0A0G2JND7 137 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 POTEMA6NI47 508 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 GCP02774 474 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 PAX3P23760 479 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 GTF2H1P32780 548 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 CPA2P48052 419 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 PUM3Q15397 648 aaKnown RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 SLC1A5Q15758 541 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 SEL1L2Q5TEA6 688 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 OLFML1Q6UWY5 402 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 PALB2Q86YC2 1186 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 OR6Y1Q8NGX8 325 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 SLC30A5Q8TAD4 765 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 DGCR14Q96DF8 476 aaKnown RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 SIX2Q9NPC8 291 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 SEPT11Q9NVA2 429 aaKnown RBP13.59□□□□□ -0.23
HERC3-203ENST00000407637 TAS2R14Q9NYV8 317 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
HERC3-203ENST00000407637 MAFGO15525 162 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 GAS8O95995 478 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
HERC3-203ENST00000407637 LRRC8BQ6P9F7 803 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 KLHDC10Q6PID8 442 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 TRABD2AQ86V40 505 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 RASSF3Q86WH2 238 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 UBL4BQ8N7F7 174 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
HERC3-203ENST00000407637 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms