RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PCDHA3Q9Y5H8 950 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 WDR81Q562E7 1941 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 TRIM66O15016 1216 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 KIAA0391O15091 583 aaKnown RBP18.06■□□□□ 0.48
NUP50-203ENST00000407019 PYGMP11217 842 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 EMC2Q15006 297 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 PRAMEF18Q5VWM3 479 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 FAM107BQ9H098 131 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 CNOT8Q9UFF9 292 aaKnown RBP18.06■□□□□ 0.48
NUP50-203ENST00000407019 KCNG1Q9UIX4 513 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 FZD1Q9UP38 647 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 ATP8A1Q9Y2Q0 1164 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 SNX24Q9Y343 169 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 KIAA1217Q5T5P2 1943 aa18.06■□□□□ 0.48
NUP50-203ENST00000407019 PODXLO00592 558 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 NDUFAB1O14561 156 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 ZBTB7AO95365 584 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 HPDP32754 393 aaPredicted RBP18.05■□□□□ 0.48
NUP50-203ENST00000407019 CORO7P57737 925 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 ANGEL2Q5VTE6 544 aaKnown RBP18.05■□□□□ 0.48
NUP50-203ENST00000407019 C15orf39Q6ZRI6 1047 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 SLC13A5Q86YT5 568 aaPredicted RBP18.05■□□□□ 0.48
NUP50-203ENST00000407019 RUNDC3BQ96NL0 473 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 MAF1Q9H063 256 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
NUP50-203ENST00000407019 FZD9O00144 591 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 GBP1P32455 592 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 POLGP54098 1239 aaPredicted RBP18.05■□□□□ 0.48
NUP50-203ENST00000407019 EIF3BP55884 814 aaKnown RBP18.05■□□□□ 0.48
NUP50-203ENST00000407019 RWDD2BP57060 319 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 STRN3Q13033 797 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 PSMD6Q15008 389 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 CYP1B1Q16678 543 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 CPNE8Q86YQ8 564 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 ZDHHC14Q8IZN3 488 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 EPN3Q9H201 632 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 RASSF4Q9H2L5 321 aa18.05■□□□□ 0.48
NUP50-203ENST00000407019 BCCIPQ9P287 314 aaKnown RBP eCLIP18.05■□□□□ 0.48
NUP50-203ENST00000407019 PLTPP55058 493 aa18.04■□□□□ 0.48
NUP50-203ENST00000407019 PTGISQ16647 500 aa18.04■□□□□ 0.48
NUP50-203ENST00000407019 TTC27Q6P3X3 843 aa18.04■□□□□ 0.48
NUP50-203ENST00000407019 CCDC137Q6PK04 289 aaKnown RBP18.04■□□□□ 0.48
NUP50-203ENST00000407019 ZDHHC24Q6UX98 284 aa18.04■□□□□ 0.48
NUP50-203ENST00000407019 ZNF516Q92618 1163 aa18.04■□□□□ 0.48
NUP50-203ENST00000407019 FNBP1Q96RU3 617 aa18.04■□□□□ 0.48
NUP50-203ENST00000407019 PARP2Q9UGN5 583 aa18.04■□□□□ 0.48
NUP50-203ENST00000407019 SPDYE16A6NNV3 312 aaPredicted RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 CLDN10P78369 228 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 IFFO1Q0D2I5 559 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 KRT71Q3SY84 523 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 WDR44Q5JSH3 913 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 FAM84AQ96KN4 292 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 HOXC10Q9NYD6 342 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 GRHL1Q9NZI5 618 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 MYPNQ86TC9 1320 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 LTBP3Q9NS15 1303 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 DOCK5Q9H7D0 1870 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 SRRM3A6NNA2 597 aaPredicted RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 OATP04181 439 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 UNGP13051 313 aaPredicted RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 SCP2P22307 547 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 COILP38432 576 aaPredicted RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 PIK3CAP42336 1068 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 PMS2P54278 862 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 LMBRD2Q68DH5 695 aaPredicted RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 ZNF677Q86XU0 584 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 PSPC1Q8WXF1 523 aaKnown RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 KLRG1Q96E93 195 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 PLVAPQ9BX97 442 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 ZNF302Q9NR11 478 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 AGO2Q9UKV8 859 aaKnown RBP18.03■□□□□ 0.48
NUP50-203ENST00000407019 STYXL1Q9Y6J8 313 aa18.03■□□□□ 0.48
NUP50-203ENST00000407019 TCRBV7S2A1N4TA0A589 114 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 HLA-DRAP01903 254 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 TNNI1P19237 187 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 MAPK4P31152 587 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 RPL21P46778 160 aaKnown RBP18.02■□□□□ 0.48
NUP50-203ENST00000407019 FNTAP49354 379 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 NLRP11P59045 1033 aaKnown RBP18.02■□□□□ 0.48
NUP50-203ENST00000407019 BPIFB4P59827 614 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 SP2Q02086 613 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 SIX1Q15475 284 aaPredicted RBP18.02■□□□□ 0.48
NUP50-203ENST00000407019 STXBP2Q15833 593 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 ZACNQ401N2 412 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 CYFIP1Q7L576 1253 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 CCDC105Q8IYK2 499 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 FBXO25Q8TCJ0 367 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 KCNN1Q92952 543 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 TMEM143Q96AN5 459 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 TRIM11Q96F44 468 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 AVENQ9NQS1 362 aaPredicted RBP18.02■□□□□ 0.48
NUP50-203ENST00000407019 ANAPC7Q9UJX3 599 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 NOVA2Q9UNW9 492 aaKnown RBP18.02■□□□□ 0.48
NUP50-203ENST00000407019 PCDHB2Q9Y5E7 798 aa18.02■□□□□ 0.48
NUP50-203ENST00000407019 MAFBQ9Y5Q3 323 aaPredicted RBP18.02■□□□□ 0.48
NUP50-203ENST00000407019 ZNFX1Q9P2E3 1918 aaKnown RBP18.02■□□□□ 0.47
NUP50-203ENST00000407019 ANKRD65E5RJM6 399 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms