RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CNBD2Q96M20 576 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 TBC1D10AQ9BXI6 508 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 NYXQ9GZU5 481 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 LACRTQ9GZZ8 138 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 MRPL47Q9HD33 250 aaKnown RBP10.55□□□□□ -0.72
PTPRM-203ENST00000400060 GCNT4Q9P109 453 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 PCDHB13Q9Y5F0 798 aa10.55□□□□□ -0.72
PTPRM-203ENST00000400060 MYOM1P52179 1685 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 WDR91A4D1P6 747 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 SAC3D1A6NKF1 404 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 RIPK2O43353 540 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 GJB6O95452 261 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 PLCG2P16885 1265 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 SLFN12Q8IYM2 578 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 SPICE1Q8N0Z3 855 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 OR6Y1Q8NGX8 325 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 ZNF333Q96JL9 665 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 DAPK2Q9UIK4 370 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 GPC6Q9Y625 555 aaPredicted RBP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 GLI2P10070 1586 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 COL3A1P02461 1466 aaPredicted RBP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 ROBO2Q9HCK4 1378 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 NCF2P19878 526 aaPredicted RBP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 ZAP70P43403 619 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 TNNI2P48788 182 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 GDPD5Q8WTR4 605 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 CEP19Q96LK0 163 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 TLR10Q9BXR5 811 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 PHACTR1Q9C0D0 580 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 PARVGQ9HBI0 331 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 SMARCAL1Q9NZC9 954 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 SLC24A2Q9UI40 661 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 ERVV-2B6SEH9 535 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 TSPAN9O75954 239 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 UQCRBP14927 111 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 PAX3P23760 479 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 COPAP53621 1224 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 PTK2BQ14289 1009 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 PDK3Q15120 406 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 DDB1Q16531 1140 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 ARHGAP44Q17R89 818 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 FRMD5Q7Z6J6 570 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 DDX42Q86XP3 938 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 SLC17A8Q8NDX2 589 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 EPS8L3Q8TE67 593 aaKnown RBP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 GIPC3Q8TF64 312 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 TLCD1Q96CP7 247 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 MMTAG2Q9BU76 263 aaKnown RBP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 DDX18Q9NVP1 670 aaKnown RBP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 HEY2Q9UBP5 337 aa10.54□□□□□ -0.72
PTPRM-203ENST00000400060 WARS2Q9UGM6 360 aaKnown RBP10.54□□□□□ -0.72
PTPRM-203ENST00000400060 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 H7C1W4 665 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 PDE2AO00408 941 aaPredicted RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 ASLP04424 464 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 HLA-DOAP06340 250 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 MYBL1P10243 752 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 SLC1A1P43005 524 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 KPNA2P52292 529 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 STX1BP61266 288 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 STOX1Q6ZVD7 989 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 ENDOVQ8N8Q3 282 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 TTC13Q8NBP0 860 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 RASSF5Q8WWW0 418 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 RBM17Q96I25 401 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 IL25Q9H293 177 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 ARMT1Q9H993 441 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 SPDYE5A6NIY4 337 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 H0Y626 953 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 XPOTO43592 962 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 TOM1L1O75674 476 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 GCNT3O95395 438 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 A1BGP04217 495 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 CCNB1P14635 433 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 PHKG2P15735 406 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 JAK1P23458 1154 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 PTPROQ16827 1216 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 ADCK1Q86TW2 530 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 PDPRQ8NCN5 879 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 LPIN2Q92539 896 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 DACH2Q96NX9 599 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 BTBD9Q96Q07 612 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 PURBQ96QR8 312 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 NACA2Q9H009 215 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 PAIP1Q9H074 479 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 STRIP2Q9ULQ0 834 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 A2ML1A8K2U0 1454 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 KPNA7A9QM74 516 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 FAM25AB3EWG3 89 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 FAM25CB3EWG5 89 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 FAM25GB3EWG6 89 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 HSPA1AP0DMV8 641 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 HSPA1BP0DMV9 641 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 ANPEPP15144 967 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 ATP6V1B1P15313 513 aa10.53□□□□□ -0.72
PTPRM-203ENST00000400060 OASLQ15646 514 aaKnown RBP10.53□□□□□ -0.72
PTPRM-203ENST00000400060 AOC3Q16853 763 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms