RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 RNASELQ05823 741 aaKnown RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 SURF1Q15526 300 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 SPOUT1Q5T280 376 aaKnown RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 TTI2Q6NXR4 508 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 INTS8Q75QN2 995 aaKnown RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 FILIP1Q7Z7B0 1213 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 LUZP1Q86V48 1076 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 ECHDC2Q86YB7 292 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 CBWD2Q8IUF1 395 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 SLC9A9Q8IVB4 645 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 C12orf56Q8IXR9 622 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 CACTINQ8WUQ7 758 aaKnown RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 LPPQ93052 612 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 FAM193BQ96PV7 902 aaPredicted RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 DUSP9Q99956 384 aaKnown RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 BPIFA3Q9BQP9 254 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 FUCA2Q9BTY2 467 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 THAP9Q9H5L6 903 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 MMRN2Q9H8L6 949 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 METTL14Q9HCE5 456 aaKnown RBP9.7□□□□□ -0.86
BRCC3-206ENST00000399042 PTPRHQ9HD43 1115 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 FANCLQ9NW38 375 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 STYXL1Q9Y6J8 313 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 ZMYM2Q9UBW7 1377 aa9.7□□□□□ -0.86
BRCC3-206ENST00000399042 KCNJ18B7U540 433 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 H0YGN5 161 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 RBAK-RBAKDNI3L0D1 243 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 IKBKBO14920 756 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 XPOTO43592 962 aaKnown RBP9.69□□□□□ -0.86
BRCC3-206ENST00000399042 STX10O60499 249 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 AKAP3O75969 853 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 RECQL4O94761 1208 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 SERPINC1P01008 464 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 TNNC2P02585 160 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 CXCL8P10145 99 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 TNFSF9P41273 254 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 CASP4P49662 377 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 TFAMQ00059 246 aaKnown RBP9.69□□□□□ -0.86
BRCC3-206ENST00000399042 SPAG1Q07617 926 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 CETN1Q12798 172 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 BIRC3Q13489 604 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 KCNJ12Q14500 433 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 DSC3Q14574 896 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 GPNMBQ14956 572 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 NFIL3Q16649 462 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 FILIP1LQ4L180 1135 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 ZBTB41Q5SVQ8 909 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 UBXN11Q5T124 520 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 NPAS4Q8IUM7 802 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 CD302Q8IX05 232 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 CEP120Q8N960 986 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 CNOT6LQ96LI5 555 aaKnown RBP9.69□□□□□ -0.86
BRCC3-206ENST00000399042 RNPC3Q96LT9 517 aaKnown RBP9.69□□□□□ -0.86
BRCC3-206ENST00000399042 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.69□□□□□ -0.862e-6■■■■□ 23.3
BRCC3-206ENST00000399042 RSAD1Q9HA92 442 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 TMEM161AQ9NX61 479 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 GIT1Q9Y2X7 761 aa9.69□□□□□ -0.86
BRCC3-206ENST00000399042 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.69□□□□□ -0.86
BRCC3-206ENST00000399042 DNAH12Q6ZR08 3092 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 TBKBP1A7MCY6 615 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 LACTBL1A8MY62 500 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 C9IYK1 514 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 ZNF623O75123 536 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 POMCP01189 267 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 TPM3P06753 285 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 TMEM191BP0C7N4 346 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 FGFR1P11362 822 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 MLH1P40692 756 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 VAMP7P51809 220 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 WDR5P61964 334 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 CYP24A1Q07973 514 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 TMEM132DQ14C87 1099 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 ENOX2Q16206 610 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 PAN2Q504Q3 1202 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 ZCWPW2Q504Y3 356 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 TMEM240Q5SV17 173 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 FOXR2Q6PJQ5 311 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 FRMD5Q7Z6J6 570 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 RTN4RL1Q86UN2 441 aaPredicted RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 DHX40Q8IX18 779 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 TMEM192Q8IY95 271 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 CCDC150Q8NCX0 1101 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 SMG8Q8ND04 991 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 ZSWIM2Q8NEG5 633 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 HELQQ8TDG4 1101 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 ANKRD36BP1Q96IX9 119 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 YME1L1Q96TA2 773 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 GAD1Q99259 594 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 MKNK1Q9BUB5 465 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 HAPLN2Q9GZV7 340 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 ELAC1Q9H777 363 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 PLEKHA5Q9HAU0 1116 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 PDE11AQ9HCR9 933 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 SAMSN1Q9NSI8 373 aaKnown RBP9.68□□□□□ -0.86
BRCC3-206ENST00000399042 DMAC2Q9NW81 257 aa9.68□□□□□ -0.86
BRCC3-206ENST00000399042 KANSL3Q9P2N6 904 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms