RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FAM47AQ5JRC9 791 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 MFSD14BQ5SR56 506 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 NT5DC1Q5TFE4 455 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 RNF220Q5VTB9 566 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 DARS2Q6PI48 645 aaKnown RBP3.94□□□□□ -1.78
PTPRC-205ENST00000391970 COL23A1Q86Y22 540 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-205ENST00000391970 SP8Q8IXZ3 490 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 LGI4Q8N135 537 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 DCBLD1Q8N8Z6 715 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 SHCBP1Q8NEM2 672 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 STON2Q8WXE9 905 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 PMM1Q92871 262 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 MTFMTQ96DP5 389 aaKnown RBP3.94□□□□□ -1.78
PTPRC-205ENST00000391970 IL17RAQ96F46 866 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 NEIL1Q96FI4 390 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-205ENST00000391970 SLC35A4Q96G79 324 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 CEP95Q96GE4 821 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 RPS6KC1Q96S38 1066 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 DPYSL5Q9BPU6 564 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 KCNH6Q9H252 994 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 AGO3Q9H9G7 860 aaKnown RBP3.94□□□□□ -1.78
PTPRC-205ENST00000391970 SEC61A2Q9H9S3 476 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 ATP6V0A4Q9HBG4 840 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 MOCS1Q9NZB8 636 aa3.94□□□□□ -1.78
PTPRC-205ENST00000391970 FEZ2Q9UHY8 353 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-205ENST00000391970 TTBK1Q5TCY1 1321 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-205ENST00000391970 A0A1W2PRX2 142 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 H3BUI4 141 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 TEX33O43247 280 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 TRIM13O60858 407 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 FTH1P19P0C7X4 201 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 SLC5A1P13866 664 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 PEX2P28328 305 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 ALDH1A3P47895 512 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 EPHB4P54760 987 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 NPEPPSP55786 919 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 DUSP8Q13202 625 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 MRPL49Q13405 166 aaKnown RBP3.93□□□□□ -1.78
PTPRC-205ENST00000391970 FGL2Q14314 439 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 POLD3Q15054 466 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-205ENST00000391970 BRD3Q15059 726 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 AFMIDQ63HM1 303 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 OTUD7BQ6GQQ9 843 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 APOA5Q6Q788 366 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 ARHGEF18Q6ZSZ5 1173 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 C11orf96Q7Z7L8 435 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 C1QL4Q86Z23 238 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 PLXDC1Q8IUK5 500 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 LRRC56Q8IYG6 542 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-205ENST00000391970 GPR135Q8IZ08 494 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 LRTOMTQ8WZ04 291 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 TOX2Q96NM4 488 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 NT5C1BQ96P26 610 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 MPHOSPH6Q99547 160 aaKnown RBP3.93□□□□□ -1.78
PTPRC-205ENST00000391970 TCF25Q9BQ70 676 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 C22orf23Q9BZE7 217 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 MEGF9Q9H1U4 602 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 WDCPQ9H6R7 721 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 ARMT1Q9H993 441 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 ZMAT3Q9HA38 289 aaKnown RBP3.93□□□□□ -1.78
PTPRC-205ENST00000391970 GOLGA2P5Q9HBQ8 144 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 PNPOQ9NVS9 261 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 RUVBL1Q9Y265 456 aaKnown RBP3.93□□□□□ -1.78
PTPRC-205ENST00000391970 PCDHGB6Q9Y5F9 930 aa3.93□□□□□ -1.78
PTPRC-205ENST00000391970 CFAP69A5D8W1 941 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 F2RL2O00254 374 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 FRS3O43559 492 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 CDC14BO60729 498 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 PQBP1O60828 265 aaKnown RBP3.92□□□□□ -1.78
PTPRC-205ENST00000391970 STC2O76061 302 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 CD1AP06126 327 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 IFIT2P09913 472 aaKnown RBP3.92□□□□□ -1.78
PTPRC-205ENST00000391970 RAP2AP10114 183 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 CR2P20023 1033 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 CFPP27918 469 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 SMARCA1P28370 1054 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 PRDX5P30044 214 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 TXKP42681 527 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 PPP2CBP62714 309 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 PPP2CAP67775 309 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 PTH1RQ03431 593 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 BIRC2Q13490 618 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 ATP2B3Q16720 1220 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 FAM214AQ32MH5 1076 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 FLYWCH1Q4VC44 716 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 DACT2Q5SW24 774 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 SEM1Q6ZVN7 128 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 FAM90A1Q86YD7 464 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 KRTAP1-3Q8IUG1 177 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 KRT78Q8N1N4 520 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 SH2D3CQ8N5H7 860 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 SYT8Q8NBV8 401 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 BORCS6Q96GS4 357 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 LRRC37BQ96QE4 947 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 LMF1Q96S06 567 aa3.92□□□□□ -1.78
PTPRC-205ENST00000391970 STRBPQ96SI9 672 aaKnown RBP3.92□□□□□ -1.78
PTPRC-205ENST00000391970 NAA15Q9BXJ9 866 aaKnown RBP3.92□□□□□ -1.78
PTPRC-205ENST00000391970 C11orf54Q9H0W9 315 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-205ENST00000391970 C12orf65Q9H3J6 166 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms