RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ZIM2Q9NZV7 527 aa2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 TUBD1Q9UJT1 453 aa2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 ZNF180Q9UJW8 692 aa2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 PNMA8BQ9ULN7 279 aaPredicted RBP2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 G3BP2Q9UN86 482 aaKnown RBP2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 THRAP3Q9Y2W1 955 aaKnown RBP2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 EID1Q9Y6B2 187 aa2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 SETD1BQ9UPS6 1966 aaKnown RBP2.21□□□□□ -2.06
RNU6-440P-201ENST00000390882 CCDC154A6NI56 674 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 HTRA2O43464 458 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 FOXS1O43638 330 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 ITGA10O75578 1167 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 RAD17O75943 681 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 ZRANB2O95218 330 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 POU2F2P09086 479 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 U2AF1L5P0DN76 240 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PF4V1P10720 104 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 IL2RBP14784 551 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PDCP20941 246 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 EDNRBP24530 442 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PTPN7P35236 360 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 SREBF1P36956 1147 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 U2AF1Q01081 240 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 HHEXQ03014 270 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 FOXL1Q12952 345 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 DUSP8Q13202 625 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 MRPL49Q13405 166 aaKnown RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PIN1Q13526 163 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 GTF2H3Q13889 308 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 SAFB2Q14151 953 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 SEPT2Q15019 361 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PPP2R5AQ15172 486 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 UAP1L1Q3KQV9 507 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 FAM47AQ5JRC9 791 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 RRP12Q5JTH9 1297 aaKnown RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 FKBP15Q5T1M5 1219 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 MFSD5Q6N075 450 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 POLNQ7Z5Q5 900 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 FAM83AQ86UY5 434 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 GSPT2Q8IYD1 628 aaKnown RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 ULK2Q8IYT8 1036 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 FUKQ8N0W3 1084 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PQLC1Q8N2U9 271 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PRR18Q8N4B5 295 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 LILRA3Q8N6C8 439 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 OR7D4Q8NG98 312 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 SPATA3Q8NHX4 192 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 JPH3Q8WXH2 748 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 EDAQ92838 391 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 TMEM176AQ96HP8 235 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 ZNF512Q96ME7 567 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PLEKHG4BQ96PX9 1271 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 OR14A2Q96R54 314 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 UHRF1Q96T88 793 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 NUP88Q99567 741 aaPredicted RBP2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 CDH19Q9H159 772 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 EPC1Q9H2F5 836 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 DMRT3Q9NQL9 472 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 TRPS1Q9UHF7 1281 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 LIMCH1Q9UPQ0 1083 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 IPPQ9Y573 584 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 PCDHA13Q9Y5I0 950 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 SLC30A1Q9Y6M5 507 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 ZMYM3Q14202 1370 aa2.2□□□□□ -2.06
RNU6-440P-201ENST00000390882 TBKBP1A7MCY6 615 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 SGTAO43765 313 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 NUDT3O95989 172 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 COMTP21964 271 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 MSX2P35548 267 aaPredicted RBP2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 SLC6A9P48067 706 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 MAPK7Q13164 816 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 SP140Q13342 867 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 IL10RAQ13651 578 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 TUBA3CQ13748 450 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 MST1LQ2TV78 715 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 METTL24Q5JXM2 366 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 THEMIS2Q5TEJ8 643 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 FNDC7Q5VTL7 733 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 TUBA3EQ6PEY2 450 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 MAMDC4Q6UXC1 1216 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 Q6ZSN1 163 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 USP45Q70EL2 814 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 MIGA2Q7L4E1 593 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 ZNF572Q7Z3I7 529 aaPredicted RBP2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 APBB1IPQ7Z5R6 666 aaPredicted RBP2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 TTC7BQ86TV6 843 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 SGMS1Q86VZ5 419 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 C1orf210Q8IVY1 113 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 TPH2Q8IWU9 490 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 RHOT1Q8IXI2 618 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 RAVER1Q8IY67 606 aaKnown RBP2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 ANKRD35Q8N283 1001 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 D2HGDHQ8N465 521 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 OR2I1PQ8NGU4 316 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 MDM1Q8TC05 714 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 CCHCR1Q8TD31 782 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 CASKIN2Q8WXE0 1202 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 STON2Q8WXE9 905 aa2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 HOXB13Q92826 284 aaPredicted RBP2.19□□□□□ -2.06
RNU6-440P-201ENST00000390882 MIEF2Q96C03 454 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms